CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00590100
(
Haemonchus contortus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HCOI00590100
T336395_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00590100.t1
Sox
41
97
IFVKEHFAKHRPKDLVEGKNTMKEAGAIWRSLDEASRKKYEELSKRYREQKIKEFEA
HCOI00590100.t1
Sox
136
205
PEKPPTAYNLYVQERYNKLKAQGEPIVPVVKVMPRVSAEWKGMSATAREPYVKKAAQLLEEYKVKLEEWK
HCOI00590100.t2
Sox
41
99
IFVKEHFAKHRPKDLVEGKNTMKEAGAIWRSLDEASRKKYEELSKRYREQKIKEFEALS
HCOI00590100.t2
Sox
148
217
PEKPPTAYNLYVQERYNKLKAQGEPIVPVVKVMPRVSAEWKGMSATAREPYVKKAAQLLEEYKVKLEEWK
Links
Other
Sox
family TFs
Other
Haemonchus contortus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_02227
Capronia coronata
A1O1_02227
N
A1O5_01375
Cladophialophora psammophila
A1O5_01375
N
A1O9_01675
Exophiala aquamarina
A1O9_01675
N
G647_03899
Cladophialophora carrionii
G647_03899
N
HMPREF1120_03150
Exophiala dermatitidis
HMPREF1120_03150
N
HMPREF1541_10300
Cyphellophora europaea
HMPREF1541_10300
N
PV04_04466
Capronia semiimmersa
PV04_04466
N
PV05_06165
Exophiala xenobiotica
PV05_06165
N
PV07_05283
Cladophialophora immunda
PV07_05283
N
PV08_02326
Exophiala spinifera
PV08_02326
N
PV09_04703
Verruconis gallopava
PV09_04703
N
PV11_02320
Exophiala sideris
PV11_02320
N
Z517_06395
Fonsecaea pedrosoi
Z517_06395
N
Z518_00786
Rhinocladiella mackenziei
Z518_00786
N
Z519_11894
Cladophialophora bantiana
Z519_11894
N