RSKR_0000113200 (Rhabditophanes kr3021)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RSKR_0000113200 T336852_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000113200.1 Sox 57 126

Links

Other Sox family TFs
Other Rhabditophanes kr3021 TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC210616.4_FG005 Zea mays AC210616.4_FG005 N 0.000
BGIOSGA008478 Oryza indica BGIOSGA008478 N 0.000
BGIOSGA016530 Oryza indica BGIOSGA016530 N 0.000
BRADI3G46680 Brachypodium distachyon BRADI3G46680 N 0.000
BRADI3G46690 Brachypodium distachyon BRADI3G46690 N 0.000
BRADI5G12127 Brachypodium distachyon BRADI5G12127 N 0.000
F775_13449 Aegilops tauschii F775_13449 N 0.000
F775_15862 Aegilops tauschii F775_15862 N 0.000
GRMZM2G040481 Zea mays GRMZM2G040481 N 0.000
GRMZM2G044322 Zea mays GRMZM2G044322 N 0.000
LPERR02G17460 Leersia perrieri LPERR02G17460 N 0.000
LPERR04G11520 Leersia perrieri LPERR04G11520 N 0.000
MLOC_13416 Hordeum vulgare MLOC_13416 N 0.000
MLOC_75776 Hordeum vulgare MLOC_75776 N 0.000
OGLUM02G21750 Oryza glumaepatula OGLUM02G21750 N 0.000
OGLUM04G14540 Oryza glumaepatula OGLUM04G14540 N 0.000
OGLUM07G06040 Oryza glumaepatula OGLUM07G06040 N 0.000
OLONG_026940 Oryza longistaminata OLONG_026940 N 0.000
OMERI02G21100 Oryza meridionalis OMERI02G21100 N 0.000
OMERI04G13070 Oryza meridionalis OMERI04G13070 N 0.000
ONIVA02G23720 Oryza nivara ONIVA02G23720 N 0.000
ONIVA04G12810 Oryza nivara ONIVA04G12810 N 0.000
OPUNC02G19370 Oryza punctata OPUNC02G19370 N 0.000
OPUNC04G12540 Oryza punctata OPUNC04G12540 N 0.000
ORGLA02G0186100 Oryza glaberrima ORGLA02G0186100 N 0.000
ORGLA04G0116800 Oryza glaberrima ORGLA04G0116800 N 0.000
ORUFI02G22630 Oryza rufipogon ORUFI02G22630 N 0.000
ORUFI04G16070 Oryza rufipogon ORUFI04G16070 N 0.000
OS04G0456900 Oryza sativa OS04G0456900 N 0.000
Pavir.Aa01600 Panicum virgatum Pavir.Aa01600 N 0.000
Pavir.Ab01993 Panicum virgatum Pavir.Ab01993 N 0.000
Pavir.Gb01550 Panicum virgatum Pavir.Gb01550 N 0.000
Sb06g018710 Sorghum bicolor Sb06g018710 N 0.000
Si009909m.g Setaria italica Si009909m.g N 0.000
Si017107m.g Setaria italica Si017107m.g N 0.000
TRAES3BF114600150CFD_g Triticum aestivum TRAES3BF114600150CFD_g N 0.000
Traes_2AL_C76F4E089 Triticum aestivum Traes_2AL_C76F4E089 N 0.000
Traes_2BL_7BE6FCE7D Triticum aestivum Traes_2BL_7BE6FCE7D N 0.000
Traes_6AL_44D4E284B Triticum aestivum Traes_6AL_44D4E284B N 0.000
Traes_6DL_10077D5F6 Triticum aestivum Traes_6DL_10077D5F6 N 0.000
TRIUR3_20987 Triticum urartu TRIUR3_20987 N 0.000