CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold98-EXSNAP2012.51
(
Pristionchus exspectatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
scaffold98-EXSNAP2012.51
T336914_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold98-EXSNAP2012.51
Sox
32
96
PKRALSAYFIWMNENRAALTKPGMGVSEVAKAAGVEWKKLKDKTKWEKAAAEDKKRYEREMKAYK
Links
Other
Sox
family TFs
Other
Pristionchus exspectatus
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ga02636
Panicum virgatum
Pavir.Ga02636
N
Pavir.J06737
Panicum virgatum
Pavir.J06737
N
Pavir.J06991
Panicum virgatum
Pavir.J06991
N
Sb06g002515
Sorghum bicolor
Sb06g002515
N
Si009624m.g
Setaria italica
Si009624m.g
N