SVE_0008400 (Strongyloides venezuelensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SVE_0008400 T337057_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.440 0.319
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.440 0.319
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.440 0.319
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.440 0.319
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.440 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0008400.1 Sox 38 106

Links

Other Sox family TFs
Other Strongyloides venezuelensis TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05301 Capronia coronata A1O1_05301 I
A1O3_09463 Capronia epimyces A1O3_09463 I
A1O9_04358 Exophiala aquamarina A1O9_04358 I
ACLA_058410 Aspergillus clavatus CADACLAG00005638 I
ACRE_086950 Acremonium chrysogenum ACRE_086950 I
AFUA_8G05010 Aspergillus fumigatus CADAFUAG00002982 I
ATEG_00121 Aspergillus terreus CADATEAG00010137 I
BBA_07230 Beauveria bassiana BBA_07230 I
Bcin10g00520 Botrytis cinerea Bcin10g00520 I
CADANGAG00013243 Aspergillus niger CADANGAG00013243 I
CCM_03986 Cordyceps militaris CCM_03986 I
CFIO01_09458 Colletotrichum fioriniae CFIO01_09458 I
CGGC5_941 Colletotrichum gloeosporioides CGGC5_941 I
CH063_02646 Colletotrichum higginsianum CH063_02646 I
CIMG_02171 Coccidioides immitis CIMG_02171 I
Cob_10292 Colletotrichum orbiculare Cob_10292 I
CPC735_038450 Coccidioides posadasii CPC735_038450 I
CPUR_07913 Claviceps purpurea CPUR_07913 I
CSUB01_03484 Colletotrichum sublineola CSUB01_03484 I
CTHT_0067990 Chaetomium thermophilum CTHT_0067990 I
EPUS_00874 Endocarpon pusillum EPUS_00874 I
estExt_fgenesh3_kg.C_10150 Neurospora discreta estExt_fgenesh3_kg.C_10150 I
e_gw1.00168.127.1 Aspergillus carbonarius e_gw1.00168.127.1 I
e_gw1.13.52.1 Cryphonectria parasitica e_gw1.13.52.1 I
FFUJ_12194 Fusarium fujikuroi FFUJ_12194 I
fgenesh1_pm.sca_14_chr10_3_0000034 Nectria haematococca fgenesh1_pm.sca_14_chr10_3_0000034 I
FGRRES_01877 Fusarium graminearum FGRRES_01877 D
FOXG_04255 Fusarium oxysporum FOXG_04255 I
FPSE_05401 Fusarium pseudograminearum FPSE_05401 I
FVEG_07376 Fusarium verticillioides FVEG_07376 I
G647_02686 Cladophialophora carrionii G647_02686 I
GGTG_10509 Gaeumannomyces graminis GGTG_10509 I
GLRG_01267 Colletotrichum graminicola GLRG_01267 I
HMPREF1624_00616 Sporothrix schenckii HMPREF1624_00616 I
M7I_6075 Glarea lozoyensis M7I_6075 I
MAC_08573 Metarhizium acridum MAC_08573 I
MAJ_03692 Metarhizium majus MAJ_03692 I
MAM_01703 Metarhizium album MAM_01703 I
MANI_018170 Metarhizium anisopliae MANI_018170 I
MAPG_09942 Magnaporthe poae MAPG_09942 I
MBM_09935 Marssonina brunnea MBM_09935 I
MBR_07462 Metarhizium brunneum MBR_07462 I
MCYG_07723 Arthroderma otae MCYG_07723 I
MCYG_07723 Microsporum canis MCYG_07723 I
MGG_09200 Magnaporthe oryzae MGG_09200 I
MGU_03754 Metarhizium guizhouense MGU_03754 I
MYCTH_2302052 Myceliophthora thermophila MYCTH_2302052 I
NCU03699 Neurospora crassa NCU03699 D
NechaG96840 Fusarium solani NechaG96840 I
NEUTE1DRAFT_120248 Neurospora tetrasperma NEUTE1DRAFT_120248 I
NFIA_097820 Neosartorya fischeri CADNFIAG00008857 I
OIDMADRAFT_154644 Oidiodendron maius OIDMADRAFT_154644 I
Pc20g10390 Penicillium chrysogenum Pc20g10390 I
PCH_Pc20g10390 Penicillium rubens PCH_Pc20g10390 I
PDE_06517 Penicillium oxalicum PDE_06517 I
PDIP_02690 Penicillium digitatum PDIP_02690 I
PEX1_035970 Penicillium expansum PEX1_035970 I
PFICI_07570 Pestalotiopsis fici PFICI_07570 I
PITC_051250 Penicillium italicum PITC_051250 I
PMAA_059470 Penicillium marneffei PMAA_059470 I
PMAA_059470 Talaromyces marneffei PMAA_059470 I
PODANS_2_11930 Podospora anserina PODANS_2_11930 I
PV04_07860 Capronia semiimmersa PV04_07860 I
PV09_06044 Verruconis gallopava PV09_06044 I
PVAR5_2782 Byssochlamys spectabilis PVAR5_2782 I
S40285_05279 Stachybotrys chlorohalonata S40285_05279 I
S40285_08669 Stachybotrys chlorohalonata S40285_08669 I
S40288_05686 Stachybotrys chartarum S40288_05686 I
SAPIO_CDS0518 Scedosporium apiospermum SAPIO_CDS0518 I
SBOR_5756 Sclerotinia borealis SBOR_5756 I
SEPMUDRAFT_146750 Sphaerulina musiva SEPMUDRAFT_146750 I
SMAC_02564 Sordaria macrospora SMAC_02564 I
SPBR_07297 Sporothrix brasiliensis SPBR_07297 I
TRIATDRAFT_163506 Trichoderma atroviride TRIATDRAFT_163506 I
TRIREDRAFT_27649 Trichoderma reesei TRIREDRAFT_27649 I
TRIVIDRAFT_175568 Trichoderma virens TRIVIDRAFT_175568 I
TSTA_012520 Talaromyces stipitatus TSTA_012520 I
U727_00434251371 Penicillium solitum U727_00434251371 I
UCREL1_5559 Eutypa lata UCREL1_5559 I
UCRPA7_8393 Togninia minima UCRPA7_8393 I
UREG_01543 Uncinocarpus reesii UREG_01543 I
UV8b_2720 Ustilaginoidea virens UV8b_2720 I
VDAG_04603 Verticillium dahliae VDAG_04603 I
VDBG_09365 Verticillium alfalfae VDBG_09365 I
VDBG_09365 Verticillium albo atrum VDBG_09365 I
VHEMI10121 Torrubiella hemipterigena VHEMI10121 I
X797_003437 Metarhizium robertsii X797_003437 I
Z517_02728 Fonsecaea pedrosoi Z517_02728 I
Z518_09288 Rhinocladiella mackenziei Z518_09288 I