CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr04374
(
Ophisaurus gracilis
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Ogr04374
T337847_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Stat6
M08173_2.00
Mus musculus
NNBTTCYWVRGAANN
NNTTCYBWRGAAVNN
ChIP-seq
Mathelier et al.(2014)
MA0520.1
0.706
0.706
Stat6
M09418_2.00
Mus musculus
BDBTTCHBDRGAAV
BTTCYHVDGAAVHV
Misc
Kulakovskiy et al.(2013)
STAT6_MOUSE.H11MO.0.A
0.706
0.706
Stat6
M09644_2.00
Mus musculus
TTCCNNAGAA
TTCTNNGGAA
Misc
Heinz et al.(2010)
Macrophage-Stat6_GSE38377
0.706
0.706
Stat6
M09643_2.00
Mus musculus
NNTTCYNNRGAA
TTCYNNRGAANN
Misc
Heinz et al.(2010)
CD4-Stat6_GSE22104
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr04374
STAT
273
526
LLVDKQPPQVLKTQTKFQATVRFLLGPQLLKPPHTSFTVVADIVTEKQAREIAASHPGAVFNESTGEIVNNTAPLETNTTSNACCALFKNMLLKKIKRCDRKSTESVTEEKCAILFSANVSLGPNKTNFHLQAVSLPIVVIVHGNQDNNAKATILWDNAFAEPTRIPFMVAERVSWDKMCETLNQKFMAEVQTTKGLLDQHYFFLAQKIFDDNATTPEEFQKRPVSWSQFNKEMLPGRGFTFWQWFEGVLDLTK
Links
Other
STAT
family TFs
Other
Ophisaurus gracilis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R000713
Calypte anna
Aan_R000713
I
0.722
Afo_R009816
Aptenodytes forsteri
Afo_R009816
I
0.722
ENSAPLG00000014705
Anas platyrhynchos
ENSAPLG00000014705
I
0.718
ENSFALG00000000376
Ficedula albicollis
ENSFALG00000000376
I
0.731
ENSMEUG00000016670
Macropus eugenii
ENSMEUG00000016670
I
0.706
ENSSHAG00000006372
Sarcophilus harrisii
ENSSHAG00000006372
I
0.710
ENSSSCG00000025960
Sus scrofa
ENSSSCG00000025960
I
0.706
ENSSSCG00000026524
Sus scrofa
ENSSSCG00000026524
I
0.706
ENSTGUG00000015716
Taeniopygia guttata
ENSTGUG00000015716
I
0.727
Gfo_R015302
Geospiza fortis
Gfo_R015302
I
0.722
Pvit_05823
Pogona vitticeps
Pvit_05823
N
0.820
STAT6
Anolis carolinensis
ENSACAG00000009680
I
0.853
STAT6
Microcebus murinus
ENSMICG00000009087
I
0.702
STAT6
Monodelphis domestica
ENSMODG00000019411
I
0.706
Stat6
Mus musculus
ENSMUSG00000002147
D
0.706
Stat6
Rattus norvegicus
ENSRNOG00000025023
I
0.702