CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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stat5b.S
(
Xenopus laevis
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
XB-GENE-5913744
T337888_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT5B
M09417_2.00
Homo sapiens
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_HUMAN.H11MO.0.A
0.926
0.926
STAT5B
M11371_2.00
Homo sapiens
NDWTTCYNGGAAWHN
NDWTTCCNRGAAWHN
Transfac
Matys et al.(2006)
V$STAT5B_01
0.926
0.926
Stat5a
M09420_2.00
Mus musculus
TTCYMRGAAN
NTTCYKRGAA
Misc
Kulakovskiy et al.(2013)
STA5A_MOUSE.H11MO.0.A
0.922
0.922
Stat5b
M09421_2.00
Mus musculus
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_MOUSE.H11MO.0.A
0.922
0.922
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH68769
STAT
332
582
FIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISELQAKALLKNENTRNESSGEILNNCCVMEYHQATGTLSAHFRNMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAFAEPGRVPFIVPDKVLWPQLCDALNMKFKAEVQSNRGLSDENLLFLAQKLFNSNLSHKEDYSIMTVSWAQFNRENLPGWNYTFWQWFDGVMEVLK
Links
Other
STAT
family TFs
Other
Xenopus laevis
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006159
Ricinus communis
29908.m006159
N
0.000
cassava44367.m1
Manihot esculenta
cassava44367.m1
N
0.000
Ca_26279
Cicer arietinum
Ca_26279
N
0.000
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.000
Eucgr.L03490
Eucalyptus grandis
Eucgr.L03490
N
0.000
gene11137-v1.0-hybrid
Fragaria vesca
gene11137-v1.0-hybrid
N
0.000
LjT15C06.70.nc
Lotus japonicus
LjT15C06.70.nc
N
0.000
MTR_5g058860
Medicago truncatula
MTR_5g058860
N
0.000
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.000
Pm004863
Prunus mume
Pm004863
N
0.000
TCM_035069
Theobroma cacao
TCM_035069
N
0.000
VIT_18s0001g03310
Vitis vinifera
VIT_18s0001g03310
N
0.000