Bra009986 (Brassica rapa)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04504 (DUF573) IPR007592 Bra009986 T338272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G04930
M01309_2.00 		Arabidopsis thaliana
NNNNNRHNNN
NNNDYNNNNN		 PBM
Lambert et al.(2019)
pTH11563 		0.853 0.853
PK20442.1
M01310_2.00 		Cannabis sativa
NHDVRCCNN
NNGGYBHDN		 PBM
Lambert et al.(2019)
pTH10193 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009986.1-P Storekeeper 123 219

Links

Other Storekeeper family TFs
Other Brassica rapa TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008635 Ricinus communis 30128.m008635 I 0.768
Aquca_003_00290 Aquilegia coerulea Aquca_003_00290 I 0.737
Aquca_026_00251 Aquilegia coerulea Aquca_026_00251 I 0.726
AT3G04930 Arabidopsis thaliana AT3G04930 D 0.853
AT5G28040 Arabidopsis thaliana AT5G28040 I 0.937
Bo1g151840 Brassica oleracea Bo1g151840 I 0.905
Bo5g146880 Brassica oleracea Bo5g146880 I 0.916
Bo7g093330 Brassica oleracea Bo7g093330 I 0.916
Bostr.2570s0201 Boechera stricta Bostr.2570s0201 I 0.905
Bostr.29827s0034 Boechera stricta Bostr.29827s0034 I 0.905
Bra040416 Brassica rapa Bra040416 I 0.916
Cagra.1554s0002 Capsella grandiflora Cagra.1554s0002 I 0.926
Cagra.2179s0002 Capsella grandiflora Cagra.2179s0002 I 0.905
Carubv10001022m.g Capsella rubella Carubv10001022m.g I 0.926
Carubv10013683m.g Capsella rubella Carubv10013683m.g I 0.905
cassava22731.valid.m1 Manihot esculenta cassava22731.valid.m1 I 0.779
Ca_01216 Cicer arietinum Ca_01216 I 0.747
Ca_03737 Cicer arietinum Ca_03737 I 0.747
Ciclev10001378m.g Citrus clementina Ciclev10001378m.g I 0.737
Cla011457 Citrullus lanatus Cla011457 I 0.768
Cucsa.288940 Cucumis sativus Cucsa.288940 I 0.768
evm.TU.supercontig_264.16 Carica papaya evm.TU.supercontig_264.16 I 0.811
fgenesh2_kg.3__469__AT3G04930.1 Arabidopsis lyrata fgenesh2_kg.3__469__AT3G04930.1 I 0.905
fgenesh2_kg.6__2771__AT5G28040.1 Arabidopsis lyrata fgenesh2_kg.6__2771__AT5G28040.1 I 0.884
gene16487-v1.0-hybrid Fragaria vesca gene16487-v1.0-hybrid I 0.779
GLYMA03G40520 Glycine max GLYMA03G40520 I 0.747
GLYMA10G30160 Glycine max GLYMA10G30160 I 0.747
GLYMA19G43180 Glycine max GLYMA19G43180 I 0.747
GLYMA20G37240 Glycine max GLYMA20G37240 I 0.747
Gorai.007G285700 Gossypium raimondii Gorai.007G285700 I 0.779
Gorai.013G121800 Gossypium raimondii Gorai.013G121800 I 0.768
Lus10000940.g Linum usitatissimum Lus10000940.g I 0.747
Lus10015944.g Linum usitatissimum Lus10015944.g I 0.726
Lus10019007.g Linum usitatissimum Lus10019007.g I 0.734
MDP0000274864 Malus domestica MDP0000274864 I 0.768
MDP0000290147 Malus domestica MDP0000290147 I 0.768
MDP0000931426 Malus domestica MDP0000931426 I 0.768
mgf017918m Mimulus guttatus mgf017918m I 0.737
MTR_7g114600 Medicago truncatula MTR_7g114600 I 0.768
orange1.1g014693m.g Citrus sinensis orange1.1g014693m.g I 0.737
PGSC0003DMG400003572 Solanum tuberosum PGSC0003DMG400003572 I 0.758
PGSC0003DMG400022471 Solanum tuberosum PGSC0003DMG400022471 I 0.737
PK20442.1 Cannabis sativa PK20442.1 D 0.768
POPTR_0001s26910 Populus trichocarpa POPTR_0001s26910 I 0.758
POPTR_1258s00200 Populus trichocarpa POPTR_1258s00200 I 0.758
PRUPE_ppa006905mg Prunus persica PRUPE_ppa006905mg I 0.779
SapurV1A.0027s0820 Salix purpurea SapurV1A.0027s0820 I 0.726
SapurV1A.0276s0160 Salix purpurea SapurV1A.0276s0160 I 0.779
Solyc01g097890.2 Solanum lycopersicum Solyc01g097890.2 I 0.747
Solyc02g083750.1 Solanum lycopersicum Solyc02g083750.1 I 0.758
TCM_026408 Theobroma cacao TCM_026408 I 0.779
Thhalv10005455m.g Eutrema salsugineum Thhalv10005455m.g I 0.874
Thhalv10020724m.g Eutrema salsugineum Thhalv10020724m.g I 0.905