Carubv10001022m.g (Capsella rubella)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04504 (DUF573) IPR007592 Carubv10001022m.g T338971_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G04930
M01309_2.00 		Arabidopsis thaliana
NNNNNRHNNN
NNNDYNNNNN		 PBM
Lambert et al.(2019)
pTH11563 		0.884 0.884
PK20442.1
M01310_2.00 		Cannabis sativa
NHDVRCCNN
NNGGYBHDN		 PBM
Lambert et al.(2019)
pTH10193 		0.789 0.789
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001022m Storekeeper 122 218

Links

Other Storekeeper family TFs
Other Capsella rubella TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008635 Ricinus communis 30128.m008635 I 0.811
Aquca_003_00290 Aquilegia coerulea Aquca_003_00290 I 0.758
Aquca_026_00251 Aquilegia coerulea Aquca_026_00251 I 0.747
AT3G04930 Arabidopsis thaliana AT3G04930 D 0.884
AT5G28040 Arabidopsis thaliana AT5G28040 I 0.989
Bo1g151840 Brassica oleracea Bo1g151840 I 0.895
Bo5g146880 Brassica oleracea Bo5g146880 I 0.916
Bo7g093330 Brassica oleracea Bo7g093330 I 0.895
Bostr.2570s0201 Boechera stricta Bostr.2570s0201 I 0.937
Bostr.29827s0034 Boechera stricta Bostr.29827s0034 I 0.968
Bra009986 Brassica rapa Bra009986 I 0.926
Bra040416 Brassica rapa Bra040416 I 0.916
Cagra.1554s0002 Capsella grandiflora Cagra.1554s0002 I 1.000
Cagra.2179s0002 Capsella grandiflora Cagra.2179s0002 I 0.937
Carubv10013683m.g Capsella rubella Carubv10013683m.g I 0.937
cassava22731.valid.m1 Manihot esculenta cassava22731.valid.m1 I 0.821
Ca_01216 Cicer arietinum Ca_01216 I 0.768
Ca_03737 Cicer arietinum Ca_03737 I 0.768
Ciclev10001378m.g Citrus clementina Ciclev10001378m.g I 0.758
Cla011457 Citrullus lanatus Cla011457 I 0.779
Cucsa.288940 Cucumis sativus Cucsa.288940 I 0.779
evm.TU.supercontig_264.16 Carica papaya evm.TU.supercontig_264.16 I 0.842
fgenesh2_kg.3__469__AT3G04930.1 Arabidopsis lyrata fgenesh2_kg.3__469__AT3G04930.1 I 0.937
fgenesh2_kg.6__2771__AT5G28040.1 Arabidopsis lyrata fgenesh2_kg.6__2771__AT5G28040.1 I 0.895
gene16487-v1.0-hybrid Fragaria vesca gene16487-v1.0-hybrid I 0.811
GLYMA03G40520 Glycine max GLYMA03G40520 I 0.758
GLYMA10G30160 Glycine max GLYMA10G30160 I 0.758
GLYMA19G43180 Glycine max GLYMA19G43180 I 0.758
GLYMA20G37240 Glycine max GLYMA20G37240 I 0.758
Gorai.007G285700 Gossypium raimondii Gorai.007G285700 I 0.811
Gorai.013G121800 Gossypium raimondii Gorai.013G121800 I 0.800
LjB12P21.40.nc Lotus japonicus LjB12P21.40.nc I 0.716
Lus10000940.g Linum usitatissimum Lus10000940.g I 0.747
Lus10015944.g Linum usitatissimum Lus10015944.g I 0.737
Lus10019007.g Linum usitatissimum Lus10019007.g I 0.745
MDP0000274864 Malus domestica MDP0000274864 I 0.800
MDP0000290147 Malus domestica MDP0000290147 I 0.800
MDP0000931426 Malus domestica MDP0000931426 I 0.800
mgf017918m Mimulus guttatus mgf017918m I 0.716
MTR_7g114600 Medicago truncatula MTR_7g114600 I 0.768
orange1.1g014693m.g Citrus sinensis orange1.1g014693m.g I 0.758
PGSC0003DMG400003572 Solanum tuberosum PGSC0003DMG400003572 I 0.768
PGSC0003DMG400022471 Solanum tuberosum PGSC0003DMG400022471 I 0.747
PK20442.1 Cannabis sativa PK20442.1 D 0.789
POPTR_0001s26910 Populus trichocarpa POPTR_0001s26910 I 0.779
POPTR_1258s00200 Populus trichocarpa POPTR_1258s00200 I 0.779
PRUPE_ppa006905mg Prunus persica PRUPE_ppa006905mg I 0.811
SapurV1A.0027s0820 Salix purpurea SapurV1A.0027s0820 I 0.768
SapurV1A.0276s0160 Salix purpurea SapurV1A.0276s0160 I 0.779
Solyc01g097890.2 Solanum lycopersicum Solyc01g097890.2 I 0.758
Solyc02g083750.1 Solanum lycopersicum Solyc02g083750.1 I 0.768
TCM_026408 Theobroma cacao TCM_026408 I 0.800
Thhalv10005455m.g Eutrema salsugineum Thhalv10005455m.g I 0.905
Thhalv10020724m.g Eutrema salsugineum Thhalv10020724m.g I 0.947