Pavir.Ba00022 (Panicum virgatum)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04504 (DUF573) IPR007592 Pavir.Ba00022 T339079_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS03G0370250
M02494_2.00 		Oryza sativa
NNNVRYNNN
NNNRYBNNN		 PBM
Weirauch et al.(2014)
pTH8738 		0.916 0.916
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00022.1.p Storekeeper 82 180

Links

Other Storekeeper family TFs
Other Panicum virgatum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026216 Oryza indica BGIOSGA026216 I 0.958
BRADI1G20210 Brachypodium distachyon BRADI1G20210 I 0.958
BRADI1G61477 Brachypodium distachyon BRADI1G61477 I 0.895
F775_06570 Aegilops tauschii F775_06570 I 0.905
GRMZM2G026417 Zea mays GRMZM2G026417 I 0.832
GRMZM2G030458 Zea mays GRMZM2G030458 I 0.800
GRMZM2G075122 Zea mays GRMZM2G075122 I 0.979
GRMZM2G082318 Zea mays GRMZM2G082318 I 0.968
LPERR07G20450 Leersia perrieri LPERR07G20450 I 0.947
MLOC_10638 Hordeum vulgare MLOC_10638 I 0.905
OB07G29080 Oryza brachyantha OB07G29080 I 0.958
OBART07G23470 Oryza barthii OBART07G23470 I 0.947
OGLUM03G19400 Oryza glumaepatula OGLUM03G19400 I 0.705
OGLUM07G23550 Oryza glumaepatula OGLUM07G23550 I 0.958
OMERI03G17110 Oryza meridionalis OMERI03G17110 I 0.916
OMERI07G19920 Oryza meridionalis OMERI07G19920 I 0.958
ONIVA04G28640 Oryza nivara ONIVA04G28640 I 0.916
ONIVA07G23260 Oryza nivara ONIVA07G23260 I 0.958
OPUNC03G17850 Oryza punctata OPUNC03G17850 I 0.916
OPUNC07G22140 Oryza punctata OPUNC07G22140 I 0.958
ORGLA03G0177400 Oryza glaberrima ORGLA03G0177400 I 0.916
ORGLA07G0264000 Oryza glaberrima ORGLA07G0264000 I 0.958
ORUFI03G19470 Oryza rufipogon ORUFI03G19470 I 0.916
ORUFI07G24680 Oryza rufipogon ORUFI07G24680 I 0.958
OS03G0370250 Oryza sativa OS03G0370250 D 0.916
OS07G0636100 Oryza sativa OS07G0636100 I 0.958
Pavir.Bb03462 Panicum virgatum Pavir.Bb03462 I 0.979
Pavir.J23796 Panicum virgatum Pavir.J23796 I 0.808
Sb01g034370 Sorghum bicolor Sb01g034370 I 0.821
Sb02g040550 Sorghum bicolor Sb02g040550 I 0.979
Si030239m.g Setaria italica Si030239m.g I 0.989
Traes_2AS_8C5E619C6 Triticum aestivum Traes_2AS_8C5E619C6 I 0.979
Traes_2BS_EEE045515 Triticum aestivum Traes_2BS_EEE045515 I 0.968
Traes_2DS_6BAF1825F Triticum aestivum Traes_2DS_6BAF1825F I 0.979
Traes_4AS_928691B39 Triticum aestivum Traes_4AS_928691B39 I 0.905
Traes_4BS_96AE357C6 Triticum aestivum Traes_4BS_96AE357C6 I 0.905
Traes_4DL_21C202E37 Triticum aestivum Traes_4DL_21C202E37 I 0.905
TRIUR3_32773 Triticum urartu TRIUR3_32773 I 0.905