CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN03038
(
Caenorhabditis brenneri
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
CBN03038
T339370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tbx-43
M00716_2.00
Caenorhabditis elegans
NRGGTGTBAH
DTVACACCYN
PBM
Narasimhan et al.(2015)
pTH10927
0.825
0.750
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN03038
T-box
5
183
LKLLDNSLWREFDAHQNEMIITKIGRNLFPILEFSFKGLSEHSKYRIGITMEAMSFNKLKYTGGRWESLDVVEELLKPNEVFLEKSGRELLQRGLKLEKLKLTNSKDAVHKSDQMIRVQSMRQYIPTINLYEFHPHGGFHHVGKFQFPETKFIAVTAYQSDSVKHLKVQKNKFAQGFRD
Links
Other
T-box
family TFs
Other
Caenorhabditis brenneri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAJ_04361
Metarhizium majus
MAJ_04361
N
MAM_03600
Metarhizium album
MAM_03600
N
MANI_014246
Metarhizium anisopliae
MANI_014246
N
MBR_04823
Metarhizium brunneum
MBR_04823
N
MGU_04625
Metarhizium guizhouense
MGU_04625
N
X797_001304
Metarhizium robertsii
X797_001304
N