CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX15
(
Erinaceus europaeus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSEEUG00000003919
T339831_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX15
M03554_2.00
Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT
SELEX
Jolma et al.(2013)
TBX15_1
0.920
0.995
TBX15
M03555_2.00
Homo sapiens
AGGTGTGA
TCACACCT
SELEX
Jolma et al.(2013)
TBX15_2
0.920
0.995
TBX15
M05795_2.00
Homo sapiens
NRSGTGTBAN
NTVACACSYN
SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX
0.920
0.995
TBX15
M11378_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_01
0.920
0.995
TBX15
M11379_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_02
0.920
0.995
TBX15
M05796_2.00
Homo sapiens
NDSGYGTBAN
NTVACRCSHN
SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX
0.920
0.995
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.901
0.929
TBX18
M11380_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.901
0.929
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.901
0.929
TBX22
M11383_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX22_01
0.810
0.720
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.761
0.588
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN
NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.738
0.637
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.738
0.637
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.738
0.637
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.738
0.637
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.738
0.637
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.738
0.637
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.738
0.637
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.738
0.637
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.738
0.637
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.738
0.637
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.738
0.637
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN
NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.738
0.637
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.738
0.637
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.738
0.637
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.738
0.637
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.738
0.637
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.738
0.637
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000003556
T-box
115
304
VELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSDLSPTKPVPIGDGVKTFNFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRD
Links
Other
T-box
family TFs
Other
Erinaceus europaeus
TFs
238 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_04217
Capronia coronata
A1O1_04217
I
A1O3_01201
Capronia epimyces
A1O3_01201
I
A1O5_10463
Cladophialophora psammophila
A1O5_10463
I
A1O9_07137
Exophiala aquamarina
A1O9_07137
I
AB03036.1
Alternaria brassicicola
AB03036.1
I
AOL_s00193g129
Arthrobotrys oligospora
AOL_s00193g129
I
ARB_04706
Arthroderma benhamiae
ARB_04706
I
AUEXF2481DRAFT_36932
Aureobasidium subglaciale
AUEXF2481DRAFT_36932
I
BAUCODRAFT_31051
Baudoinia compniacensis
BAUCODRAFT_31051
N
Bcin01g10720
Botrytis cinerea
Bcin01g10720
I
CFIO01_06850
Colletotrichum fioriniae
CFIO01_06850
I
CGGC5_1402
Colletotrichum gloeosporioides
CGGC5_1402
I
CH063_07689
Colletotrichum higginsianum
CH063_07689
I
Cob_09205
Colletotrichum orbiculare
Cob_09205
I
Cob_11078
Colletotrichum orbiculare
Cob_11078
I
COCC4DRAFT_73197
Bipolaris maydis
COCC4DRAFT_73197
I
COCCADRAFT_6589
Bipolaris zeicola
COCCADRAFT_6589
I
COCMIDRAFT_35701
Bipolaris oryzae
COCMIDRAFT_35701
I
COCSADRAFT_175469
Bipolaris sorokiniana
COCSADRAFT_175469
I
COCVIDRAFT_36324
Bipolaris victoriae
COCVIDRAFT_36324
I
CTHT_0041740
Chaetomium thermophilum
CTHT_0041740
I
fgenesh1_pg.C_scaffold_9000354
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_9000354
I
G647_08755
Cladophialophora carrionii
G647_08755
I
GGTG_07647
Gaeumannomyces graminis
GGTG_07647
I
GLRG_06548
Colletotrichum graminicola
GLRG_06548
I
GMDG_04247
Pseudogymnoascus destructans
GMDG_04247
I
GSTUM_00005043001
Tuber melanosporum
GSTUM_00005043001
I
H072_4417
Dactylellina haptotyla
H072_4417
I
H101_03147
Trichophyton interdigitale
H101_03147
I
H102_02228
Trichophyton rubrum
H102_02228
I
H105_02247
Trichophyton soudanense
H105_02247
I
HMPREF1120_08353
Exophiala dermatitidis
HMPREF1120_08353
I
HMPREF1541_00985
Cyphellophora europaea
HMPREF1541_00985
I
LEMA_P091860.1
Leptosphaeria maculans
LEMA_P091860.1
I
M438DRAFT_395358
Aureobasidium pullulans
M438DRAFT_395358
I
MCYG_06105
Microsporum canis
MCYG_06105
I
MCYG_06105
Arthroderma otae
MCYG_06105
I
MGG_07925
Magnaporthe oryzae
MGG_07925
I
MGYG_05848
Microsporum gypseum
MGYG_05848
I
MPH_04494
Macrophomina phaseolina
MPH_04494
I
NCU05637
Neurospora crassa
NCU05637
D
NEUTE1DRAFT_148609
Neurospora tetrasperma
NEUTE1DRAFT_148609
I
OIDMADRAFT_28300
Oidiodendron maius
OIDMADRAFT_28300
I
PMAA_011030
Penicillium marneffei
PMAA_011030
I
PMAA_011030
Talaromyces marneffei
PMAA_011030
I
PTT_11477
Pyrenophora teres
PTT_11477
I
PV04_02426
Capronia semiimmersa
PV04_02426
I
PV05_07246
Exophiala xenobiotica
PV05_07246
I
PV06_04883
Exophiala oligosperma
PV06_04883
I
PV07_02793
Cladophialophora immunda
PV07_02793
I
PV08_03176
Exophiala spinifera
PV08_03176
I
PV09_00512
Verruconis gallopava
PV09_00512
I
PV10_00855
Exophiala mesophila
PV10_00855
I
PV11_03606
Exophiala sideris
PV11_03606
I
SAPIO_CDS9377
Scedosporium apiospermum
SAPIO_CDS9377
I
SBOR_0775
Sclerotinia borealis
SBOR_0775
I
SEPMUDRAFT_61970
Sphaerulina musiva
SEPMUDRAFT_61970
N
SETTUDRAFT_113025
Setosphaeria turcica
SETTUDRAFT_113025
I
SNOG_11524
Stagonospora nodorum
SNOG_11524
I
SNOG_11524
Phaeosphaeria nodorum
SNOG_11524
I
TEQG_07049
Trichophyton equinum
TEQG_07049
I
TESG_07963
Trichophyton tonsurans
TESG_07963
I
THITE_2126380
Thielavia terrestris
THITE_2126380
I
TRV_07523
Trichophyton verrucosum
TRV_07523
I
TSTA_006150
Talaromyces stipitatus
TSTA_006150
I
UCRPA7_1223
Togninia minima
UCRPA7_1223
I
V499_07415
Pseudogymnoascus pannorum
V499_07415
I
VDBG_10032
Verticillium alfalfae
VDBG_10032
I
VDBG_10032
Verticillium albo atrum
VDBG_10032
I
Z517_00407
Fonsecaea pedrosoi
Z517_00407
I
Z518_01937
Rhinocladiella mackenziei
Z518_01937
I
Z518_04811
Rhinocladiella mackenziei
Z518_04811
I
Z519_11340
Cladophialophora bantiana
Z519_11340
I