CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSNLEG00000000427
(
Nomascus leucogenys
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSNLEG00000000427
T340156_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbx4
M00831_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3973
0.920
1.000
TBX4
M03558_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX4_1
0.920
1.000
TBX4
M03559_2.00
Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT
SELEX
Jolma et al.(2013)
TBX4_2
0.920
1.000
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.899
0.934
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA
TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.899
0.934
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.899
0.934
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA
TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.899
0.934
TBX5
M11374_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.899
0.934
TBX5
M11375_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.899
0.934
Tbx5
M11387_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.899
0.934
TBX5
M11376_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.899
0.934
TBX5
M11377_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.899
0.934
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA
TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.790
0.621
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN
NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.785
0.654
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.785
0.654
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN
NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.785
0.654
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN
NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.785
0.654
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.785
0.654
TBX2
M11381_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.785
0.654
TBX2
M11382_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.785
0.654
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN
NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.785
0.654
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN
NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.783
0.637
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN
NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.783
0.637
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.783
0.637
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR
YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.783
0.637
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN
NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.783
0.637
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.773
0.676
XP_001195863
M02498_2.00
Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT
PBM
Weirauch et al.(2014)
pTH9340
0.773
0.670
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.752
0.637
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN
NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.752
0.637
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN
NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.741
0.610
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.741
0.610
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.741
0.610
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.741
0.610
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.741
0.610
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.741
0.610
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.741
0.610
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.741
0.610
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.741
0.610
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.741
0.610
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.741
0.610
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN
NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.741
0.610
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.741
0.610
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.741
0.610
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.741
0.610
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.741
0.610
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.741
0.610
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSNLEP00000000497
T-box
70
252
VGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRG
Links
Other
T-box
family TFs
Other
Nomascus leucogenys
TFs
339 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R000701
Calypte anna
Aan_R000701
N
Afo_R002412
Aptenodytes forsteri
Afo_R002412
N
Alligator_sinensis_CCG003108.1
Alligator sinensis
Alligator_sinensis_CCG003108.1
N
Brh_R006311
Buceros rhinoceros
Brh_R006311
N
Cmyd_10015463
Chelonia mydas
Cmyd_10015463
N
ENSAMEG00000011882
Ailuropoda melanoleuca
ENSAMEG00000011882
N
ENSAPLG00000006218
Anas platyrhynchos
ENSAPLG00000006218
N
ENSCSAG00000005096
Chlorocebus sabaeus
ENSCSAG00000005096
N
ENSFALG00000009125
Ficedula albicollis
ENSFALG00000009125
N
ENSGALG00000002928
Gallus gallus
ENSGALG00000002928
N
ENSGMOG00000007431
Gadus morhua
ENSGMOG00000007431
N
ENSLACG00000008883
Latimeria chalumnae
ENSLACG00000008883
N
ENSLOCG00000004919
Lepisosteus oculatus
ENSLOCG00000004919
N
ENSMMUG00000022298
Macaca mulatta
ENSMMUG00000022298
N
ENSMPUG00000015399
Mustela putorius furo
ENSMPUG00000015399
N
ENSNLEG00000006277
Nomascus leucogenys
ENSNLEG00000006277
N
ENSOARG00000007874
Ovis aries
ENSOARG00000007874
N
ENSONIG00000002454
Oreochromis niloticus
ENSONIG00000002454
N
ENSP00000384899
Macaca fascicularis
ENSP00000384899
N
ENSP00000384899-D1
Bos grunniens
ENSP00000384899-D1
N
ENSPANG00000011632
Papio anubis
ENSPANG00000011632
N
ENSPFOG00000002553
Poecilia formosa
ENSPFOG00000002553
N
ENSPFOG00000003089
Poecilia formosa
ENSPFOG00000003089
N
ENSPMAG00000000934
Petromyzon marinus
ENSPMAG00000000934
N
ENSPPYG00000009769
Pongo abelii
ENSPPYG00000009769
N
ENSPSIG00000015717
Pelodiscus sinensis
ENSPSIG00000015717
N
ENSSHAG00000013178
Sarcophilus harrisii
ENSSHAG00000013178
N
ENSSTOG00000022640
Ictidomys tridecemlineatus
ENSSTOG00000022640
N
ENSTSYG00000000285
Tarsius syrichta
ENSTSYG00000000285
N
ENSXMAG00000012323
Xiphophorus maculatus
ENSXMAG00000012323
N
GATAD2A
Tursiops truncatus
ENSTTRG00000009875
N
GATAD2A
Sus scrofa
ENSSSCG00000013938
N
GATAD2A
Tupaia belangeri
ENSTBEG00000015854
N
GATAD2A
Taeniopygia guttata
ENSTGUG00000013885
N
GATAD2A
Microcebus murinus
ENSMICG00000015636
N
GATAD2A
Vicugna pacos
ENSVPAG00000003278
N
GATAD2A
Erinaceus europaeus
ENSEEUG00000004680
N
GATAD2A
Equus caballus
ENSECAG00000012875
N
Gatad2a
Dipodomys ordii
ENSDORG00000008536
N
GATAD2A
Cavia porcellus
ENSCPOG00000015396
N
GATAD2A
Callithrix jacchus
ENSCJAG00000005685
N
GATAD2A
Canis familiaris
ENSCAFG00000014267
N
GATAD2A
Bos taurus
ENSBTAG00000003034
N
gatad2a
Xenopus tropicalis
XB-GENE-1015730
N
GATAD2A
Pan troglodytes
ENSPTRG00000010739
N
GATAD2A
Procavia capensis
ENSPCAG00000011514
N
GATAD2A
Echinops telfairi
ENSETEG00000002642
N
GATAD2A
Sorex araneus
ENSSARG00000005282
N
GATAD2A
Meleagris gallopavo
ENSMGAG00000004036
N
GATAD2A
Felis catus
ENSFCAG00000014327
N
GATAD2A
Otolemur garnettii
ENSOGAG00000007442
N
GATAD2A
Oryctolagus cuniculus
ENSOCUG00000017513
N
GATAD2A
Homo sapiens
ENSG00000167491
N
GATAD2A
Ornithorhynchus anatinus
ENSOANG00000006409
N
GATAD2A
Myotis lucifugus
ENSMLUG00000017364
N
GATAD2A
Gorilla gorilla
ENSGGOG00000005973
N
GATAD2A
Monodelphis domestica
ENSMODG00000007189
N
GATAD2A
Loxodonta africana
ENSLAFG00000009470
N
gatad2a.L
Xenopus laevis
XB-GENE-1015735
N
gatad2a.S
Xenopus laevis
XB-GENE-17340391
N
gatad2ab
Gasterosteus aculeatus
ENSGACG00000013045
N
gatad2ab
Oryzias latipes
ENSORLG00000000720
N
gatad2ab
Takifugu rubripes
ENSTRUG00000018122
N
gatad2ab
Tetraodon nigroviridis
ENSTNIG00000013200
N
Gfo_R007527
Geospiza fortis
Gfo_R007527
N
Myotis_brandtii_GATAD2A_10018560
Myotis brandtii
Myotis_brandtii_GATAD2A_10018560
N
Ogr08049
Ophisaurus gracilis
Ogr08049
N
Pvit_05963
Pogona vitticeps
Pvit_05963
N
Tal_R009898
Tyto alba
Tal_R009898
N