tbx16 (Oryzias latipes)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSORLG00000014344 T340288_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.754 0.613
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.754 0.613
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.754 0.613
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.754 0.613
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.754 0.613
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.754 0.613
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.754 0.613
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.754 0.613
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.754 0.613
estExt_fgenesh2_pg.C_1570024
M01030_2.00 		Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN		 PBM
SebePedros et al.(2013)
pTH9244 		0.749 0.680
Tbx4
M00831_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3973 		0.736 0.613
TBX4
M03558_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX4_1 		0.736 0.613
TBX4
M03559_2.00 		Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT		 SELEX
Jolma et al.(2013)
TBX4_2 		0.736 0.613
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.735 0.619
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.735 0.619
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.735 0.619
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.735 0.619
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.735 0.619
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.735 0.619
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.735 0.619
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.735 0.619
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.735 0.619
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.735 0.619
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.735 0.619
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.735 0.619
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.735 0.619
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.735 0.619
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.735 0.613
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.735 0.613
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.735 0.613
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000017986 T-box 33 213

Links

Other T-box family TFs
Other Oryzias latipes TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001547.1 Alligator sinensis Alligator_sinensis_CCG001547.1 N
ENSAMEG00000000319 Ailuropoda melanoleuca ENSAMEG00000000319 N
ENSAMXG00000004670 Astyanax mexicanus ENSAMXG00000004670 N
ENSCSAG00000004387 Chlorocebus sabaeus ENSCSAG00000004387 N
ENSECAG00000007605 Equus caballus ENSECAG00000007605 N
ENSGACG00000004248 Gasterosteus aculeatus ENSGACG00000004248 N
ENSGACG00000007639 Gasterosteus aculeatus ENSGACG00000007639 N
ENSGMOG00000000095 Gadus morhua ENSGMOG00000000095 N
ENSMEUG00000014580 Macropus eugenii ENSMEUG00000014580 N
ENSMPUG00000006206 Mustela putorius furo ENSMPUG00000006206 N
ENSNLEG00000011306 Nomascus leucogenys ENSNLEG00000011306 N
ENSOARG00000004987 Ovis aries ENSOARG00000004987 N
ENSONIG00000002752 Oreochromis niloticus ENSONIG00000002752 N
ENSONIG00000019760 Oreochromis niloticus ENSONIG00000019760 N
ENSORLG00000006471 Oryzias latipes ENSORLG00000006471 N
ENSP00000398837 Macaca fascicularis ENSP00000398837 N
ENSP00000398837-D1 Bos grunniens ENSP00000398837-D1 N
ENSPANG00000007179 Papio anubis ENSPANG00000007179 N
ENSPFOG00000006642 Poecilia formosa ENSPFOG00000006642 N
ENSPFOG00000008123 Poecilia formosa ENSPFOG00000008123 I
ENSPPYG00000009877 Pongo abelii ENSPPYG00000009877 N
ENSSSCG00000002895 Sus scrofa ENSSSCG00000002895 N
ENSSTOG00000027453 Ictidomys tridecemlineatus ENSSTOG00000027453 N
ENSTNIG00000018468 Tetraodon nigroviridis ENSTNIG00000018468 N
ENSTRUG00000015234 Takifugu rubripes ENSTRUG00000015234 N
ENSXMAG00000015008 Xiphophorus maculatus ENSXMAG00000015008 I
KMT2B Oryctolagus cuniculus ENSOCUG00000012768 N
KMT2B Tursiops truncatus ENSTTRG00000002243 N
KMT2B Pan troglodytes ENSPTRG00000010858 N
KMT2B Pteropus vampyrus ENSPVAG00000012828 N
KMT2B Tupaia belangeri ENSTBEG00000007263 N
Kmt2b Rattus norvegicus ENSRNOG00000055525 N
KMT2B Otolemur garnettii ENSOGAG00000004157 N
KMT2B Bos taurus ENSBTAG00000002763 N
KMT2B Canis familiaris ENSCAFG00000006878 N
KMT2B Callithrix jacchus ENSCJAG00000010126 I
KMT2B Cavia porcellus ENSCPOG00000003718 N
KMT2B Dasypus novemcinctus ENSDNOG00000005517 N
Kmt2b Dipodomys ordii ENSDORG00000009061 N
KMT2B Erinaceus europaeus ENSEEUG00000013250 N
KMT2B Felis catus ENSFCAG00000006381 N
KMT2B Homo sapiens ENSG00000272333 N
KMT2B Gorilla gorilla ENSGGOG00000016796 N
KMT2B Microcebus murinus ENSMICG00000009928 N
KMT2B Myotis lucifugus ENSMLUG00000011406 N
KMT2B Macaca mulatta ENSMMUG00000002381 N
KMT2B Monodelphis domestica ENSMODG00000013994 N
Kmt2b Mus musculus ENSMUSG00000006307 N
KMT2B Ochotona princeps ENSOPRG00000001336 N
kmt2bb Danio rerio ENSDARG00000060697 N
Myotis_brandtii_WBP7_10035154 Myotis brandtii Myotis_brandtii_WBP7_10035154 N
Ogr13647 Ophisaurus gracilis Ogr13647 N
Pvit_00563 Pogona vitticeps Pvit_00563 N
XP_002940678 Xenopus tropicalis XP_002940678 N