TBX18 (Pan troglodytes)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSPTRG00000018390 T340401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.920 1.000
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.920 1.000
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.920 1.000
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.901 0.929
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.901 0.929
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.901 0.929
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.901 0.929
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.901 0.929
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.901 0.929
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.830 0.742
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.776 0.604
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.752 0.659
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.752 0.659
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.752 0.659
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.752 0.659
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.752 0.659
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.752 0.659
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.752 0.659
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.752 0.659
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.752 0.659
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.752 0.659
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.752 0.659
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.752 0.659
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.752 0.659
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.752 0.659
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.752 0.659
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.752 0.659
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.752 0.659
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000031422 T-box 141 330
ENSPTRP00000031423 T-box 56 245

Links

Other T-box family TFs
Other Pan troglodytes TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_043000 Aspergillus clavatus CADACLAG00004293 N
AFUA_8G02710 Aspergillus fumigatus CADAFUAG00001018 N
ANIA_08885 Aspergillus nidulans CADANIAG00007984 N
ATEG_10383 Aspergillus terreus CADATEAG00001854 N
BOTBODRAFT_138635 Botryobasidium botryosum BOTBODRAFT_138635 N
CADAFLAG00012828 Aspergillus flavus CADAFLAG00012828 N
CADAORAG00004794 Aspergillus oryzae CADAORAG00004794 N
CERSUDRAFT_119740 Ceriporiopsis subvermispora CERSUDRAFT_119740 N
E5Q_05532 Mixia osmundae E5Q_05532 N
EPUS_00435 Endocarpon pusillum EPUS_00435 N
estExt_fgenesh3_kg.C_170048 Heterobasidion annosum estExt_fgenesh3_kg.C_170048 N
EURHEDRAFT_459391 Aspergillus ruber EURHEDRAFT_459391 N
FIBRA_02145 Fibroporia radiculosa FIBRA_02145 N
GALMADRAFT_256803 Galerina marginata GALMADRAFT_256803 I
HETIRDRAFT_439816 Heterobasidion irregulare HETIRDRAFT_439816 N
HYDPIDRAFT_117261 Hydnomerulius pinastri HYDPIDRAFT_117261 N
K443DRAFT_683891 Laccaria amethystina K443DRAFT_683891 N
K443DRAFT_683893 Laccaria amethystina K443DRAFT_683893 N
K443DRAFT_685043 Laccaria amethystina K443DRAFT_685043 N
LACBIDRAFT_296682 Laccaria bicolor LACBIDRAFT_296682 I
LACBIDRAFT_296690 Laccaria bicolor LACBIDRAFT_296690 N
LACBIDRAFT_315220 Laccaria bicolor LACBIDRAFT_315220 N
LACBIDRAFT_317921 Laccaria bicolor LACBIDRAFT_317921 I
M404DRAFT_1005658 Pisolithus tinctorius M404DRAFT_1005658 I
M413DRAFT_446160 Hebeloma cylindrosporum M413DRAFT_446160 I
PAXINDRAFT_169439 Paxillus involutus PAXINDRAFT_169439 N
PAXINDRAFT_172061 Paxillus involutus PAXINDRAFT_172061 N
PAXINDRAFT_78504 Paxillus involutus PAXINDRAFT_78504 N
PAXRUDRAFT_153943 Paxillus rubicundulus PAXRUDRAFT_153943 N
Pc16g00930 Penicillium chrysogenum Pc16g00930 N
PCH_Pc16g00930 Penicillium rubens PCH_Pc16g00930 N
PDE_06878 Penicillium oxalicum PDE_06878 N
PEX1_105370 Penicillium expansum PEX1_105370 N
PILCRDRAFT_789690 Piloderma croceum PILCRDRAFT_789690 N
PITC_009530 Penicillium italicum PITC_009530 N
PLICRDRAFT_57185 Plicaturopsis crispa PLICRDRAFT_57185 N
PV06_01512 Exophiala oligosperma PV06_01512 N
PVAR5_8290 Byssochlamys spectabilis PVAR5_8290 N
SERLA73DRAFT_65877 Serpula lacrymans SERLA73DRAFT_65877 I
U727_00431840181 Penicillium solitum U727_00431840181 N
UREG_01426 Uncinocarpus reesii UREG_01426 N