TBX18 (Tursiops truncatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSTTRG00000005713 T340584_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.920 0.995
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.920 0.995
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.920 0.995
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.901 0.929
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.901 0.929
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.901 0.929
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.901 0.929
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.901 0.929
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.901 0.929
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.830 0.742
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.776 0.604
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.752 0.659
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.752 0.659
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.752 0.659
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.752 0.659
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.752 0.659
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.752 0.659
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.752 0.659
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.752 0.659
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.752 0.659
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.752 0.659
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.752 0.659
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.752 0.659
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.752 0.659
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.752 0.659
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.752 0.659
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.752 0.659
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.752 0.659
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000005395 T-box 146 335

Links

Other T-box family TFs
Other Tursiops truncatus TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29955.m001177 Ricinus communis 29955.m001177 I
30055.m001548 Ricinus communis 30055.m001548 I
30226.m002055 Ricinus communis 30226.m002055 I
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I
AREB3 Arabidopsis lyrata scaffold_502836.1 I
BGIOSGA000613 Oryza indica BGIOSGA000613 I
BGIOSGA010835 Oryza indica BGIOSGA010835 I
BGIOSGA020087 Oryza indica BGIOSGA020087 I
BGIOSGA026419 Oryza indica BGIOSGA026419 I
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I
BZIP27 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3003160 I
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I
Carubv10006580m.g Capsella rubella Carubv10006580m.g I
Carubv10009177m.g Capsella rubella Carubv10009177m.g I
Carubv10018770m.g Capsella rubella Carubv10018770m.g I
cassava16074.m1 Manihot esculenta cassava16074.m1 I
cassava17300.m1 Manihot esculenta cassava17300.m1 I
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I
Ca_08143 Cicer arietinum Ca_08143 I
chr2.CM0695.170.nc Lotus japonicus chr2.CM0695.170.nc I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I
Cla009066 Citrullus lanatus Cla009066 I
Cla013878 Citrullus lanatus Cla013878 I
Cla022926 Citrullus lanatus Cla022926 I
Cucsa.184670 Cucumis sativus Cucsa.184670 I
Cucsa.364380 Cucumis sativus Cucsa.364380 I
Cucsa.396070 Cucumis sativus Cucsa.396070 I
DPBF3 Arabidopsis thaliana AT3G56850 D
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
F775_17024 Aegilops tauschii F775_17024 I
F775_28711 Aegilops tauschii F775_28711 I
F775_31964 Aegilops tauschii F775_31964 I
FD Arabidopsis lyrata Al_scaffold_0007_453 I
FD Arabidopsis thaliana AT4G35900 I
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I
GLYMA03G00580 Glycine max GLYMA03G00580 I
GLYMA08G24340 Glycine max GLYMA08G24340 I
GLYMA15G35080 Glycine max GLYMA15G35080 I
GLYMA19G30230 Glycine max GLYMA19G30230 I
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I
GRMZM2G077124 Zea mays GRMZM2G077124 I
GRMZM2G161009 Zea mays GRMZM2G161009 I
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I
LPERR01G30010 Leersia perrieri LPERR01G30010 I
LPERR05G16840 Leersia perrieri LPERR05G16840 I
Lus10008927.g Linum usitatissimum Lus10008927.g I
Lus10028889.g Linum usitatissimum Lus10028889.g I
MDP0000215106 Malus domestica MDP0000215106 I
MDP0000273211 Malus domestica MDP0000273211 I
MDP0000740787 Malus domestica MDP0000740787 I
mgf011003m Mimulus guttatus mgf011003m I
mgf015092m Mimulus guttatus mgf015092m I
MLOC_16096 Hordeum vulgare MLOC_16096 I
MLOC_4554 Hordeum vulgare MLOC_4554 I
MLOC_6534 Hordeum vulgare MLOC_6534 I
MTR_7g088090 Medicago truncatula MTR_7g088090 I
OB01G43630 Oryza brachyantha OB01G43630 I
OB05G28440 Oryza brachyantha OB05G28440 I
OB07G32300 Oryza brachyantha OB07G32300 I
OBART01G34790 Oryza barthii OBART01G34790 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART05G21000 Oryza barthii OBART05G21000 I
OBART07G26790 Oryza barthii OBART07G26790 I
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I
OLONG_002030 Oryza longistaminata OLONG_002030 I
OLONG_003399 Oryza longistaminata OLONG_003399 I
OMERI01G32080 Oryza meridionalis OMERI01G32080 I
OMERI03G14020 Oryza meridionalis OMERI03G14020 I
OMERI05G18990 Oryza meridionalis OMERI05G18990 I
OMERI07G23410 Oryza meridionalis OMERI07G23410 I
ONIVA01G39770 Oryza nivara ONIVA01G39770 I
ONIVA03G16560 Oryza nivara ONIVA03G16560 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA05G21710 Oryza nivara ONIVA05G21710 I
ONIVA07G26520 Oryza nivara ONIVA07G26520 I
OPUNC01G33790 Oryza punctata OPUNC01G33790 I
OPUNC05G18710 Oryza punctata OPUNC05G18710 I
OPUNC07G25180 Oryza punctata OPUNC07G25180 I
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I
OS01G0813100 Oryza sativa OS01G0813100 I
OS05G0489700 Oryza sativa OS05G0489700 I
OS07G0686100 Oryza sativa OS07G0686100 I
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I
Pavir.J05672 Panicum virgatum Pavir.J05672 I
Pavir.J34085 Panicum virgatum Pavir.J34085 I
Pavir.J38875 Panicum virgatum Pavir.J38875 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I
Pm016826 Prunus mume Pm016826 I
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I
SapurV1A.0016s1330 Salix purpurea SapurV1A.0016s1330 I
SapurV1A.0025s0010 Salix purpurea SapurV1A.0025s0010 I
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I
Sb01g036810 Sorghum bicolor Sb01g036810 I
Sb02g043620 Sorghum bicolor Sb02g043620 I
Sb03g040510 Sorghum bicolor Sb03g040510 I
Sb09g023920 Sorghum bicolor Sb09g023920 I
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I
Si001731m.g Setaria italica Si001731m.g I
Si002173m.g Setaria italica Si002173m.g I
Si022639m.g Setaria italica Si022639m.g I
Solyc02g083520.2 Solanum lycopersicum Solyc02g083520.2 I
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I
TCM_000152 Theobroma cacao TCM_000152 I
TCM_044596 Theobroma cacao TCM_044596 I
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I
Traes_2BL_D0D6F6846 Triticum aestivum Traes_2BL_D0D6F6846 I
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I
TRIUR3_06726 Triticum urartu TRIUR3_06726 I
TRIUR3_12792 Triticum urartu TRIUR3_12792 I
TRIUR3_24203 Triticum urartu TRIUR3_24203 I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I
TRIUR3_31111 Triticum urartu TRIUR3_31111 I
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I