CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GK15086
(
Drosophila willistoni
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
FBgn0217091
T340709_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mid
M03994_2.00
Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH
SELEX
Nitta et al.(2015)
mid_1
0.920
0.984
Tbx20
M00835_2.00
Mus musculus
NRRGTGTBAN
NTVACACYYN
PBM
Weirauch et al.(2013)
pTH3777
0.802
0.731
TBX20
M03565_2.00
Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT
SELEX
Jolma et al.(2013)
TBX20_1
0.802
0.731
TBX20
M03566_2.00
Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT
SELEX
Jolma et al.(2013)
TBX20_2
0.802
0.731
TBX20
M03567_2.00
Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN
SELEX
Jolma et al.(2013)
TBX20_3
0.802
0.731
TBX20
M03568_2.00
Homo sapiens
DAGGTGTGAWR
YWTCACACCTH
SELEX
Jolma et al.(2013)
TBX20_4
0.802
0.731
TBX20
M03569_2.00
Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT
SELEX
Jolma et al.(2013)
TBX20_5
0.802
0.731
TBX20
M05813_2.00
Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1
0.802
0.731
TBX20
M05814_2.00
Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN
SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2
0.802
0.731
TBX20
M05817_2.00
Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1
0.802
0.731
TBX20
M05818_2.00
Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW
SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2
0.802
0.731
Tbx20
M09430_2.00
Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN
Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C
0.802
0.731
Tbx20
M09650_2.00
Mus musculus
SCTGTCADCASN
NSTGHTGACAGS
Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636
0.802
0.731
TBX20
M11385_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX20_05
0.802
0.731
TBX20
M05815_2.00
Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1
0.802
0.731
TBX20
M05816_2.00
Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH
SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2
0.802
0.731
TBX20
M05819_2.00
Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1
0.802
0.731
TBX20
M05820_2.00
Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA
SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2
0.802
0.731
TBX18
M05797_2.00
Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH
SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX
0.776
0.604
TBX18
M11380_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX18_01
0.776
0.604
TBX18
M05798_2.00
Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN
SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX
0.776
0.604
TBX15
M03554_2.00
Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT
SELEX
Jolma et al.(2013)
TBX15_1
0.761
0.577
TBX15
M03555_2.00
Homo sapiens
AGGTGTGA
TCACACCT
SELEX
Jolma et al.(2013)
TBX15_2
0.761
0.577
TBX15
M05795_2.00
Homo sapiens
NRSGTGTBAN
NTVACACSYN
SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX
0.761
0.577
TBX15
M11378_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_01
0.761
0.577
TBX15
M11379_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX15_02
0.761
0.577
TBX15
M05796_2.00
Homo sapiens
NDSGYGTBAN
NTVACRCSHN
SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX
0.761
0.577
TBX22
M11383_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX22_01
0.739
0.582
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0244229
T-box
204
397
CHLETKELWDRFHELGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLLDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELHDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRD
Links
Other
T-box
family TFs
Other
Drosophila willistoni
TFs
299 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_12314
Aspergillus nidulans
CADANIAG00010387
N
AOL_s00007g13
Arthrobotrys oligospora
AOL_s00007g13
N
AUEXF2481DRAFT_433573
Aureobasidium subglaciale
AUEXF2481DRAFT_433573
N
CCM_05077
Cordyceps militaris
CCM_05077
N
CFIO01_03929
Colletotrichum fioriniae
CFIO01_03929
I
CGGC5_239
Colletotrichum gloeosporioides
CGGC5_239
I
CSUB01_07904
Colletotrichum sublineola
CSUB01_07904
I
FFUJ_05172
Fusarium fujikuroi
FFUJ_05172
N
fgenesh1_pg.sca_15_chr12_5_0000334
Nectria haematococca
fgenesh1_pg.sca_15_chr12_5_0000334
N
FGRRES_03159
Fusarium graminearum
FGRRES_03159
N
FOXG_08728
Fusarium oxysporum
FOXG_08728
N
FPSE_02066
Fusarium pseudograminearum
FPSE_02066
N
FVEG_05935
Fusarium verticillioides
FVEG_05935
N
GLRG_08945
Colletotrichum graminicola
GLRG_08945
I
HMPREF1624_05727
Sporothrix schenckii
HMPREF1624_05727
I
M438DRAFT_69086
Aureobasidium pullulans
M438DRAFT_69086
N
MAPG_10268
Magnaporthe poae
MAPG_10268
I
MAPG_11907
Magnaporthe poae
MAPG_11907
N
MGG_02226
Magnaporthe oryzae
MGG_02226
I
MGG_13919
Magnaporthe oryzae
MGG_13919
N
NechaG87897
Fusarium solani
NechaG87897
N
SBOR_5379
Sclerotinia borealis
SBOR_5379
N
TRIATDRAFT_279663
Trichoderma atroviride
TRIATDRAFT_279663
N
TRIVIDRAFT_124588
Trichoderma virens
TRIVIDRAFT_124588
N
U727_00433166161
Penicillium solitum
U727_00433166161
N
UCRNP2_7895
Neofusicoccum parvum
UCRNP2_7895
N
VDAG_09653
Verticillium dahliae
VDAG_09653
N
VDBG_03239
Verticillium albo atrum
VDBG_03239
N
VDBG_03239
Verticillium alfalfae
VDBG_03239
N
VDBG_07788
Verticillium alfalfae
VDBG_07788
N
VDBG_07788
Verticillium albo atrum
VDBG_07788
N