mid (Drosophila melanogaster)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 FBgn0261963 T340723_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mid
M03994_2.00		 Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.802 0.731
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.802 0.731
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.802 0.731
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.802 0.731
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.802 0.731
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.802 0.731
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.802 0.731
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.802 0.731
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.802 0.731
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.802 0.731
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.802 0.731
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.802 0.731
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.802 0.731
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.802 0.731
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.802 0.731
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.802 0.731
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.802 0.731
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.776 0.604
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.776 0.604
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.776 0.604
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.761 0.588
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.761 0.588
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.761 0.588
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.761 0.588
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.761 0.588
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.761 0.588
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.739 0.588
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0078726 T-box 188 381
FBpp0302039 T-box 188 381

Links

Other T-box family TFs
Other Drosophila melanogaster TFs

300 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001703 Calypte anna Aan_R001703 I
Afo_R005356 Aptenodytes forsteri Afo_R005356 I
ENSAMEG00000017449 Ailuropoda melanoleuca ENSAMEG00000017449 I
ENSAPLG00000003887 Anas platyrhynchos ENSAPLG00000003887 I
ENSCPOG00000020113 Cavia porcellus ENSCPOG00000020113 I
ENSCSAG00000003260 Chlorocebus sabaeus ENSCSAG00000003260 I
ENSFALG00000000354 Ficedula albicollis ENSFALG00000000354 I
ENSMEUG00000015727 Macropus eugenii ENSMEUG00000015727 I
ENSMLUG00000022851 Myotis lucifugus ENSMLUG00000022851 I
ENSMMUP00000015545 Macaca fascicularis ENSMMUP00000015545 I
ENSMPUG00000001784 Mustela putorius furo ENSMPUG00000001784 I
ENSNLEG00000007154 Nomascus leucogenys ENSNLEG00000007154 I
ENSOANG00000010494 Ornithorhynchus anatinus ENSOANG00000010494 I
ENSPANG00000010677 Papio anubis ENSPANG00000010677 I
ENSPPYG00000003801 Pongo abelii ENSPPYG00000003801 I
ENSPSIG00000013654 Pelodiscus sinensis ENSPSIG00000013654 I
ENSSHAG00000016670 Sarcophilus harrisii ENSSHAG00000016670 I
ENSTGUG00000012778 Taeniopygia guttata ENSTGUG00000012778 I
ENSVPAG00000008979 Vicugna pacos ENSVPAG00000008979 I
Gfo_R003636 Geospiza fortis Gfo_R003636 I
Myotis_brandtii_PGR_10023403 Myotis brandtii Myotis_brandtii_PGR_10023403 I
PGR Sus scrofa ENSSSCG00000014977 I
PGR Tursiops truncatus ENSTTRG00000000030 I
PGR Callithrix jacchus ENSCJAG00000000583 I
Pgr Rattus norvegicus ENSRNOG00000006831 I
PGR Pteropus vampyrus ENSPVAG00000006626 I
PGR Pan troglodytes ENSPTRG00000004206 I
PGR Choloepus hoffmanni ENSCHOG00000007092 I
PGR Canis familiaris ENSCAFG00000003978 I
PGR Gallus gallus ENSGALG00000017195 I
PGR Ochotona princeps ENSOPRG00000008534 I
PGR Otolemur garnettii ENSOGAG00000012310 I
PGR Oryctolagus cuniculus ENSOCUG00000014693 I
PGR Dasypus novemcinctus ENSDNOG00000048850 I
Pgr Mus musculus ENSMUSG00000031870 D
PGR Equus caballus ENSECAG00000011511 I
PGR Monodelphis domestica ENSMODG00000000509 I
PGR Macaca mulatta ENSMMUG00000011846 I
PGR Echinops telfairi ENSETEG00000009960 I
PGR Microcebus murinus ENSMICG00000006331 I
PGR Felis catus ENSFCAG00000011489 I
PGR Gorilla gorilla ENSGGOG00000016358 I
PGR Homo sapiens ENSG00000082175 D
Pvit_10729 Pogona vitticeps Pvit_10729 I
Tal_R011412 Tyto alba Tal_R011412 I