CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mls-1
(
Caenorhabditis elegans
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
WBGene00003376
T340931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
H14A12.4
T-box
33
210
VFLQSSNLWRRFHNLGTEMIVTKSGRRMFPTLSVIIAGLDPVKSYVVMVDLECIEMKRFRYSFHQSKWISTGPGESELPSRMFVHTDSPARGAHWMRAPVSFDKMKLTNNQLDNNGHIIVNSMHKYRPRVHIIEQDDSQKRHTFSFEETEFIAVTAYQNHRITSLKIESNPFAKGFRE
Links
Other
T-box
family TFs
Other
Caenorhabditis elegans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_16638
Phytophthora parasitica
F443_16638
N
fgenesh_scip_prom.46568.338
Phytophthora kernoviae
fgenesh_scip_prom.46568.338
N
HpaG800700
Hyaloperonospora arabidopsidis
HpaG800700
N
maker-pag1_scaffold_406-snap-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_406-snap-gene-0.12
N
maker-par_contig_1799-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1799-fgenesh-gene-0.0
N
maker-pir_contig_225-snap-gene-0.15
Pythium irregulare
maker-pir_contig_225-snap-gene-0.15
N
maker-piw_contig_308-snap-gene-0.10
Pythium iwayamai
maker-piw_contig_308-snap-gene-0.10
N
Phyra96060
Phytophthora ramorum
Phyra96060
N
Physo138656
Phytophthora sojae
Physo138656
N
PITG_05989
Phytophthora infestans
PITG_05989
N
PYU1_G004815
Pythium ultimum
PYU1_G004815
N