Brh_R004487 (Buceros rhinoceros)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Brh_R004487 T341014_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.920 0.995
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.920 0.995
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.920 0.995
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.920 0.995
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.920 0.995
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.920 0.995
TBX18
M05797_2.00 		Homo sapiens
DDAGGTGTGARV
BYTCACACCTHH		 SELEX
Yin et al.(2017)
TBX18_eDBD_HT-SELEX 		0.901 0.934
TBX18
M11380_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX18_01 		0.901 0.934
TBX18
M05798_2.00 		Homo sapiens
NDAGGYGTGAAN
NTTCACRCCTHN		 SELEX
Yin et al.(2017)
TBX18_eDBD_Methyl-HT-SELEX 		0.901 0.934
TBX22
M11383_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX22_01 		0.810 0.720
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.761 0.588
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.738 0.637
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.738 0.637
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.738 0.637
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.738 0.637
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.738 0.637
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.738 0.637
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.738 0.637
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.738 0.637
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.738 0.637
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.738 0.637
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.738 0.637
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.738 0.637
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.738 0.637
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.738 0.637
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.738 0.637
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.738 0.637
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.738 0.637
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R004487 T-box 47 236

Links

Other T-box family TFs
Other Buceros rhinoceros TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004097 Aedes aegypti AAEL004097 N
AALB009972 Anopheles albimanus AALB009972 N
AARA003420 Anopheles arabiensis AARA003420 N
AATE003836 Anopheles atroparvus AATE003836 N
ACEP15313 Atta cephalotes ACEP15313 N
ACEP15314 Atta cephalotes ACEP15314 N
ACEP15330 Atta cephalotes ACEP15330 N
ACHR005166 Anopheles christyi ACHR005166 N
ACOM026226 Anopheles coluzzii ACOM026226 N
ACUA018116 Anopheles culicifacies ACUA018116 N
ACYPI003697 Acyrthosiphon pisum ACYPI003697 N
ADAC001260 Anopheles darlingi ADAC001260 N
ADIR000502 Anopheles dirus ADIR000502 N
AFAF001212 Anopheles farauti AFAF001212 N
AFUN009606 Anopheles funestus AFUN009606 N
AGAP012342 Anopheles gambiae AGAP012342 N
AMAM003031 Anopheles maculatus AMAM003031 N
AMEC021898 Anopheles melas AMEC021898 N
AMEM007635 Anopheles merus AMEM007635 N
AMIN009356 Anopheles minimus AMIN009356 N
AQUA002997 Anopheles quadriannulatus AQUA002997 N
ASTEI02368 Anopheles stephensi ASTEI02368 N
BGIBMGA008915 Bombyx mori BGIBMGA008915 N
BGIBMGA008965 Bombyx mori BGIBMGA008965 N
Cflo_06471--XP_001120327.1_APIME Camponotus floridanus Cflo_06471--XP_001120327.1_APIME N
Cflo_09321--XP_393312.1_APIME Camponotus floridanus Cflo_09321--XP_393312.1_APIME N
Cflo_12495--XP_001120327.1_APIME Camponotus floridanus Cflo_12495--XP_001120327.1_APIME N
CLEC002260 Cimex lectularius CLEC002260 N
CLEC002262 Cimex lectularius CLEC002262 N
CPIJ003409 Culex quinquefasciatus CPIJ003409 N
CpipJ_CPIJ003409 Culex pipiens CpipJ_CPIJ003409 N
DAPPUDRAFT_299514 Daphnia pulex DAPPUDRAFT_299514 N
DAPPUDRAFT_64307 Daphnia pulex DAPPUDRAFT_64307 N
GB43778 Apis mellifera GB43778 N
GB43788 Apis mellifera GB43788 N
HHAL003217-PA Halyomorpha halys HHAL003217-PA N
HMEL008302 Heliconius melpomene HMEL008302 N
HMEL013921 Heliconius melpomene HMEL013921 N
Hsal_08372--XP_393312.1_APIME Harpegnathos saltator Hsal_08372--XP_393312.1_APIME N
Hsal_08385--XP_001120327.1_APIME Harpegnathos saltator Hsal_08385--XP_001120327.1_APIME N
KGM_04455 Danaus plexippus KGM_04455 N
L798_10924 Zootermopsis nevadensis L798_10924 I
L798_10928 Zootermopsis nevadensis L798_10928 I
LDEC006635 Leptinotarsa decemlineata LDEC006635 N
LDEC006636 Leptinotarsa decemlineata LDEC006636 N
LDEC015408 Leptinotarsa decemlineata LDEC015408 N
LLOJ005066 Lutzomyia longipalpis LLOJ005066 N
LLOJ009833 Lutzomyia longipalpis LLOJ009833 N
MCINX007973 Melitaea cinxia MCINX007973 N
PHUM375920 Pediculus humanus PHUM375920 N
PHUM375930 Pediculus humanus PHUM375930 N
PPAI000981 Phlebotomus papatasi PPAI000981 N
RPRC006229 Rhodnius prolixus RPRC006229 N
SINV15880 Solenopsis invicta SINV15880 N
SINV15898 Solenopsis invicta SINV15898 N
TC005541 Tribolium castaneum TC005541 N
TC006580 Tribolium castaneum TC006580 N
YQE_12730 Dendroctonus ponderosae YQE_12730 N
YQE_12733 Dendroctonus ponderosae YQE_12733 N