Gfo_R000255 (Geospiza fortis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Gfo_R000255 T341082_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX15
M03554_2.00 		Homo sapiens
AGGTGTGAAATTCACACCT
AGGTGTGAATTTCACACCT		 SELEX
Jolma et al.(2013)
TBX15_1 		0.156 1.000
TBX15
M03555_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX15_2 		0.156 1.000
TBX15
M05795_2.00 		Homo sapiens
NRSGTGTBAN
NTVACACSYN		 SELEX
Yin et al.(2017)
TBX15_eDBD_HT-SELEX 		0.156 1.000
TBX15
M11378_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_01 		0.156 1.000
TBX15
M11379_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX15_02 		0.156 1.000
TBX15
M05796_2.00 		Homo sapiens
NDSGYGTBAN
NTVACRCSHN		 SELEX
Yin et al.(2017)
TBX15_eDBD_Methyl-HT-SELEX 		0.156 1.000
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R000255 T-box 114 139

Links

Other T-box family TFs
Other Geospiza fortis TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011188 Aedes aegypti AAEL011188 N 0.823
AAEL014129 Aedes aegypti AAEL014129 N 0.823
AAEL015073 Aedes aegypti AAEL015073 N 0.876
AALB000412 Anopheles albimanus AALB000412 N 0.863
AALB000419 Anopheles albimanus AALB000419 N 0.876
AALB004779 Anopheles albimanus AALB004779 N 0.876
AALB008495 Anopheles albimanus AALB008495 I 0.870
Aan_R013329 Calypte anna Aan_R013329 I 0.156
AARA000518 Anopheles arabiensis AARA000518 I 0.870
AARA011011 Anopheles arabiensis AARA011011 N 0.873
AARA011018 Anopheles arabiensis AARA011018 N 0.863
AATE006365 Anopheles atroparvus AATE006365 N 0.876
AATE013760 Anopheles atroparvus AATE013760 I 0.870
AATE017887 Anopheles atroparvus AATE017887 N 0.863
ACEP16055 Atta cephalotes ACEP16055 N 0.872
ACEP16057 Atta cephalotes ACEP16057 N 0.832
ACEP16104 Atta cephalotes ACEP16104 N 0.788
ACEP18439 Atta cephalotes ACEP18439 N 0.832
ACEP18779 Atta cephalotes ACEP18779 N 0.867
ACEP25260 Atta cephalotes ACEP25260 N 0.856
ACHR005872 Anopheles christyi ACHR005872 N 0.876
ACHR009192 Anopheles christyi ACHR009192 I 0.870
ACOM023902 Anopheles coluzzii ACOM023902 N 0.876
ACOM023939 Anopheles coluzzii ACOM023939 N 0.803
ACOM024986 Anopheles coluzzii ACOM024986 N 0.876
ACUA016860 Anopheles culicifacies ACUA016860 N 0.873
ACUA020382 Anopheles culicifacies ACUA020382 I 0.870
ACUA023844 Anopheles culicifacies ACUA023844 N 0.796
ADAC010175 Anopheles darlingi ADAC010175 N 0.860
ADAC010219 Anopheles darlingi ADAC010219 N 0.816
ADIR000205 Anopheles dirus ADIR000205 I 0.870
ADIR010886 Anopheles dirus ADIR010886 N 0.863
ADIR010894 Anopheles dirus ADIR010894 N 0.876
AEPI001839 Anopheles epiroticus AEPI001839 N 0.876
AEPI004513 Anopheles epiroticus AEPI004513 I 0.870
AFAF006342 Anopheles farauti AFAF006342 I 0.870
AFAF009935 Anopheles farauti AFAF009935 N 0.876
AFAF009954 Anopheles farauti AFAF009954 N 0.876
AFAF014429 Anopheles farauti AFAF014429 N 0.863
AFAF020534 Anopheles farauti AFAF020534 N 0.865
Afo_R005490 Aptenodytes forsteri Afo_R005490 I 0.156
AFUN001006 Anopheles funestus AFUN001006 I 0.870
AFUN010565 Anopheles funestus AFUN010565 N 0.876
AFUN010572 Anopheles funestus AFUN010572 N 0.860
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I 0.156
AMAM002835 Anopheles maculatus AMAM002835 I 0.870
AMAM007431 Anopheles maculatus AMAM007431 N 0.876
AMAM018266 Anopheles maculatus AMAM018266 N 0.865
AMEC006545 Anopheles melas AMEC006545 N 0.863
AMEC008441 Anopheles melas AMEC008441 N 0.876
AMEC017817 Anopheles melas AMEC017817 I 0.870
AMEM000859 Anopheles merus AMEM000859 N 0.876
AMEM004241 Anopheles merus AMEM004241 N 0.796
AMEM006552 Anopheles merus AMEM006552 N 0.807
AMEM009812 Anopheles merus AMEM009812 N 0.772
AMEM014259 Anopheles merus AMEM014259 N 0.876
AMIN000989 Anopheles minimus AMIN000989 N 0.876
AMIN000996 Anopheles minimus AMIN000996 N 0.863
AMIN008751 Anopheles minimus AMIN008751 I 0.870
ANCCAN_17995 Ancylostoma caninum ANCCAN_17995 N 0.866
ANCDUO_08930 Ancylostoma duodenale ANCDUO_08930 N 0.866
AQUA000252 Anopheles quadriannulatus AQUA000252 N 0.863
AQUA000259 Anopheles quadriannulatus AQUA000259 N 0.876
AQUA010988 Anopheles quadriannulatus AQUA010988 N 0.876
ASIM_0000332801 Anisakis simplex ASIM_0000332801 N 0.863
ASIM_0000883501 Anisakis simplex ASIM_0000883501 N 0.863
ASIM_0001369201 Anisakis simplex ASIM_0001369201 N 0.787
ASIS004860 Anopheles sinensis ASIS004860 N 0.863
ASIS022129 Anopheles sinensis ASIS022129 N 0.832
ASIS023746 Anopheles sinensis ASIS023746 N 0.847
ASTEI05182 Anopheles stephensi ASTEI05182 N 0.876
ASTEI08593 Anopheles stephensi ASTEI08593 I 0.870
augustus_masked-nMf.1.1.scaf00847-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00847-processed-gene-0.0 N 0.846
A_01376 Schistosoma haematobium A_01376 N 0.803
A_07251 Schistosoma haematobium A_07251 N 0.879
BAG86626 Xenopus laevis BAG86626 N 0.854
BGIBMGA002993 Bombyx mori BGIBMGA002993 N 0.863
BGIBMGA003172 Bombyx mori BGIBMGA003172 N 0.876
BGIBMGA012896 Bombyx mori BGIBMGA012896 N 0.834
BGLB008488 Biomphalaria glabrata BGLB008488 N 0.879
BGLB013266 Biomphalaria glabrata BGLB013266 N 0.879
Brh_R004487 Buceros rhinoceros Brh_R004487 I 0.156
BTMF_0000314701 Brugia timori BTMF_0000314701 N 0.863
BTMF_0001014001 Brugia timori BTMF_0001014001 N 0.849
BXY_1202100 Bursaphelenchus xylophilus BXY_1202100 N 0.846
CAA04813 Xenopus laevis CAA04813 N 0.868
CapteG199350 Capitella teleta CapteG199350 N 0.829
Cflo_07687--XP_001122560.1_APIME Camponotus floridanus Cflo_07687--XP_001122560.1_APIME N 0.773
CGI_10019141 Crassostrea gigas CGI_10019141 N 0.773
CGI_10019474 Crassostrea gigas CGI_10019474 N 0.885
CGOC_0001405301 Cylicostephanus goldi CGOC_0001405301 N 0.753
CJA24373 Caenorhabditis japonica CJA24373 N 0.770
CLEC007093 Cimex lectularius CLEC007093 N 0.863
CLEC007100 Cimex lectularius CLEC007100 N 0.841
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I 0.156
CPIJ000431 Culex quinquefasciatus CPIJ000431 N 0.799
CPIJ000719 Culex quinquefasciatus CPIJ000719 I 0.870
CPIJ007737 Culex quinquefasciatus CPIJ007737 N 0.863
CpipJ_CPIJ000431 Culex pipiens CpipJ_CPIJ000431 N 0.799
CpipJ_CPIJ000719 Culex pipiens CpipJ_CPIJ000719 I 0.870
CpipJ_CPIJ007737 Culex pipiens CpipJ_CPIJ007737 N 0.863
D915_02168 Fasciola hepatica D915_02168 N 0.870
D915_09884 Fasciola hepatica D915_09884 N 0.873
D918_04294 Trichuris suis D918_04294 N 0.835
DICVIV_06159 Dictyocaulus viviparus DICVIV_06159 N 0.804
DME_0000913401 Dracunculus medinensis DME_0000913401 N 0.863
ECPE_0001424601 Echinostoma caproni ECPE_0001424601 N 0.870
EEL_0000193501 Elaeophora elaphi EEL_0000193501 N 0.863
EEL_0000897101 Elaeophora elaphi EEL_0000897101 N 0.806
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I 0.156
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I 0.156
ENSECAG00000002502 Equus caballus ENSECAG00000002502 I 0.876
ENSETEG00000015428 Echinops telfairi ENSETEG00000015428 I 0.767
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I 0.156
ENSGACG00000000841 Gasterosteus aculeatus ENSGACG00000000841 N 0.825
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I 0.156
ENSGMOG00000002691 Gadus morhua ENSGMOG00000002691 N 0.825
ENSGMOG00000010368 Gadus morhua ENSGMOG00000010368 N 0.803
ENSLACG00000007688 Latimeria chalumnae ENSLACG00000007688 N 0.200
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I 0.156
ENSMEUG00000005689 Macropus eugenii ENSMEUG00000005689 N 0.291
ENSMEUG00000014480 Macropus eugenii ENSMEUG00000014480 I 0.791
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I 0.156
ENSNLEG00000005347 Nomascus leucogenys ENSNLEG00000005347 I 0.159
ENSOANG00000002255 Ornithorhynchus anatinus ENSOANG00000002255 N 0.824
ENSOANG00000031362 Ornithorhynchus anatinus ENSOANG00000031362 I 0.876
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I 0.156
ENSP00000358437 Macaca fascicularis ENSP00000358437 I 0.156
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I 0.156
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I 0.156
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I 0.156
ENSPMAG00000004017 Petromyzon marinus ENSPMAG00000004017 N 0.767
ENSPMAG00000006729 Petromyzon marinus ENSPMAG00000006729 N 0.754
ENSPMAG00000008021 Petromyzon marinus ENSPMAG00000008021 N 0.767
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I 0.156
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I 0.156
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I 0.156
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I 0.156
ENSSSCG00000006723 Sus scrofa ENSSSCG00000006723 I 0.882
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I 0.156
ENSTGUG00000013354 Taeniopygia guttata ENSTGUG00000013354 I 0.920
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I 0.156
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I 0.156
EVEC_0000199201 Enterobius vermicularis EVEC_0000199201 N 0.835
GF19459 Drosophila ananassae FBgn0096468 N 0.879
GPUH_0000709501 Gongylonema pulchrum GPUH_0000709501 N 0.845
GPUH_0002107201 Gongylonema pulchrum GPUH_0002107201 N 0.854
Hba_09878 Heterorhabditis bacteriophora Hba_09878 N 0.814
HelroG183031 Helobdella robusta HelroG183031 N 0.825
HHAL002271-PA Halyomorpha halys HHAL002271-PA I 0.870
HHAL004081-PA Halyomorpha halys HHAL004081-PA N 0.869
HMEL012428 Heliconius melpomene HMEL012428 N 0.860
HPLM_0000022701 Haemonchus placei HPLM_0000022701 N 0.866
Hsal_04124--XP_001122560.1_APIME Harpegnathos saltator Hsal_04124--XP_001122560.1_APIME I 0.870
Hsal_09266--XP_394607.3_APIME Harpegnathos saltator Hsal_09266--XP_394607.3_APIME N 0.872
ISCW003118 Ixodes scapularis ISCW003118 N 0.832
ISCW019279 Ixodes scapularis ISCW019279 N 0.832
ISCW019282 Ixodes scapularis ISCW019282 N 0.872
ISCW019286 Ixodes scapularis ISCW019286 N 0.896
KGM_02027 Danaus plexippus KGM_02027 N 0.876
KGM_02039 Danaus plexippus KGM_02039 N 0.838
KGM_02695 Danaus plexippus KGM_02695 N 0.866
KGM_15498 Danaus plexippus KGM_15498 N 0.839
L798_05217 Zootermopsis nevadensis L798_05217 N 0.854
LCUP000435 Lucilia cuprina LCUP000435 N 0.876
LCUP008638 Lucilia cuprina LCUP008638 I 0.870
LDEC003104 Leptinotarsa decemlineata LDEC003104 N 0.860
LDEC010815 Leptinotarsa decemlineata LDEC010815 N 0.879
LDEC017550 Leptinotarsa decemlineata LDEC017550 N 0.865
LLOJ003747 Lutzomyia longipalpis LLOJ003747 N 0.876
LOAG_04396 Loa loa LOAG_04396 N 0.794
LOAG_12591 Loa loa LOAG_12591 N 0.845
LOAG_12746 Loa loa LOAG_12746 N 0.863
LotgiG176571 Lottia gigantea LotgiG176571 N 0.821
maker-nMf.1.1.scaf12105-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf12105-augustus-gene-0.3 N 0.872
MDOA013116 Musca domestica MDOA013116 N 0.807
MESCA003495 Megaselia scalaris MESCA003495 N 0.885
MhA1_Contig117.frz3.gene29 Meloidogyne hapla MhA1_Contig117.frz3.gene29 N 0.815
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I 0.156
nAv.1.0.1.g04274 Acanthocheilonema viteae nAv.1.0.1.g04274 N 0.845
NBR_0000902501 Nippostrongylus brasiliensis NBR_0000902501 N 0.866
nDi.2.2.2.g06107 Dirofilaria immitis nDi.2.2.2.g06107 N 0.863
nDi.2.2.2.g08934 Dirofilaria immitis nDi.2.2.2.g08934 N 0.796
NECAME_12883 Necator americanus NECAME_12883 N 0.866
nLs.2.1.2.g03772 Litomosoides sigmodontis nLs.2.1.2.g03772 N 0.863
nLs.2.1.2.g07026 Litomosoides sigmodontis nLs.2.1.2.g07026 N 0.854
nOo.2.0.1.g05406 Onchocerca ochengi nOo.2.0.1.g05406 N 0.806
nOo.2.0.1.g09130 Onchocerca ochengi nOo.2.0.1.g09130 N 0.863
nRc.2.0.1.g29422 Romanomermis culicivorax nRc.2.0.1.g29422 N 0.885
Ocbimv22015178m.g Octopus bimaculoides Ocbimv22015178m.g N 0.879
Ocbimv22018978m.g Octopus bimaculoides Ocbimv22018978m.g N 0.841
OESDEN_04734 Oesophagostomum dentatum OESDEN_04734 N 0.763
OFLC_0000606701 Onchocerca flexuosa OFLC_0000606701 N 0.863
OFLC_0000825301 Onchocerca flexuosa OFLC_0000825301 N 0.845
OFLC_0001538801 Onchocerca flexuosa OFLC_0001538801 N 0.856
Ogr02070 Ophisaurus gracilis Ogr02070 N 0.876
Ogr11254 Ophisaurus gracilis Ogr11254 N 0.774
PEQ_0001376901 Parascaris equorum PEQ_0001376901 N 0.825
PHUM147980 Pediculus humanus PHUM147980 N 0.885
PHUM322720 Pediculus humanus PHUM322720 N 0.879
PPAI011117 Phlebotomus papatasi PPAI011117 N 0.879
Pvit_04496 Pogona vitticeps Pvit_04496 I 0.156
PXEA_0001641201 Protopolystoma xenopodis PXEA_0001641201 N 0.867
PXEA_0002678801 Protopolystoma xenopodis PXEA_0002678801 N 0.899
PXEA_0002881901 Protopolystoma xenopodis PXEA_0002881901 N 0.873
RPRC001515 Rhodnius prolixus RPRC001515 N 0.885
RPRC001599 Rhodnius prolixus RPRC001599 N 0.807
RPRC009191 Rhodnius prolixus RPRC009191 N 0.872
SCUD_0000486401 Schistosoma curassoni SCUD_0000486401 N 0.795
SINV11021 Solenopsis invicta SINV11021 N 0.863
SINV17820 Solenopsis invicta SINV17820 I 0.870
Sjc_0021800 Schistosoma japonicum Sjc_0021800 N 0.879
Sjc_0063960 Schistosoma japonicum Sjc_0063960 N 0.870
SMTD_0000201501 Schistosoma mattheei SMTD_0000201501 N 0.870
SMTD_0000982301 Schistosoma mattheei SMTD_0000982301 N 0.879
SMTD_0001831201 Schistosoma mattheei SMTD_0001831201 N 0.734
SMUV_0000328201 Syphacia muris SMUV_0000328201 N 0.872
SNAPOd2T00004191001 Oikopleura dioica SNAPOd2T00004191001 N 0.792
SNAPOd2T00025690001 Oikopleura dioica SNAPOd2T00025690001 N 0.879
SPER_0000012201 Spirometra erinaceieuropaei SPER_0000012201 N 0.896
SPER_0000102601 Spirometra erinaceieuropaei SPER_0000102601 N 0.870
SPU_017169 Strongylocentrotus purpuratus SPU_017169 N 0.845
SPU_018391 Strongylocentrotus purpuratus SPU_018391 N 0.903
SROB_0000780501 Schistosoma rodhaini SROB_0000780501 N 0.734
SROB_0000887301 Schistosoma rodhaini SROB_0000887301 N 0.879
SSLN_0001304401 Schistocephalus solidus SSLN_0001304401 N 0.896
SSLN_0001366501 Schistocephalus solidus SSLN_0001366501 N 0.872
SVE_1699100 Strongyloides venezuelensis SVE_1699100 N 0.774
SVUK_0001816001 Strongylus vulgaris SVUK_0001816001 N 0.866
TASK_0000235801 Taenia asiatica TASK_0000235801 N 0.870
TBX15 Anolis carolinensis ENSACAG00000008131 I 0.156
TBX15 Bos taurus ENSBTAG00000007767 I 0.358
TBX15 Canis familiaris ENSCAFG00000009976 I 0.156
TBX15 Callithrix jacchus ENSCJAG00000005662 I 0.156
TBX15 Cavia porcellus ENSCPOG00000000615 I 0.156
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I 0.165
Tbx15 Dipodomys ordii ENSDORG00000005620 N 0.835
TBX15 Equus caballus ENSECAG00000023325 I 0.156
TBX15 Erinaceus europaeus ENSEEUG00000003919 I 0.156
TBX15 Felis catus ENSFCAG00000023731 I 0.156
TBX15 Homo sapiens ENSG00000092607 D 0.156
TBX15 Gorilla gorilla ENSGGOG00000013468 I 0.156
TBX15 Loxodonta africana ENSLAFG00000018452 I 0.156
TBX15 Meleagris gallopavo ENSMGAG00000014235 I 0.156
TBX15 Myotis lucifugus ENSMLUG00000002958 I 0.156
TBX15 Macaca mulatta ENSMMUG00000009257 I 0.156
TBX15 Monodelphis domestica ENSMODG00000005319 I 0.156
Tbx15 Mus musculus ENSMUSG00000027868 I 0.871
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I 0.156
TBX15 Otolemur garnettii ENSOGAG00000007282 I 0.156
TBX15 Pan troglodytes ENSPTRG00000001172 I 0.156
TBX15 Pteropus vampyrus ENSPVAG00000015733 I 0.156
Tbx15 Rattus norvegicus ENSRNOG00000019565 I 0.156
TBX15 Tupaia belangeri ENSTBEG00000014589 I 0.660
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I 0.156
tbx15 Takifugu rubripes ENSTRUG00000003945 I 0.289
TBX15 Tursiops truncatus ENSTTRG00000011006 I 0.156
tbx15 Xenopus tropicalis XB-GENE-483924 I 0.156
TBX18 Gorilla gorilla ENSGGOG00000027982 I 0.884
TBX2 Homo sapiens ENSG00000121068 D 0.841
TBX22 Homo sapiens ENSG00000122145 D 0.878
TBX22 Sus scrofa ENSSSCG00000012449 I 0.878
Tbx5 Mus musculus ENSMUSG00000018263 D 0.780
TC013511 Tribolium castaneum TC013511 N 0.845
TCLT_0000604501 Thelazia callipaeda TCLT_0000604501 N 0.856
TCLT_0000808201 Thelazia callipaeda TCLT_0000808201 N 0.863
TCNE_0000688201 Toxocara canis TCNE_0000688201 N 0.860
TELCIR_17831 Teladorsagia circumcincta TELCIR_17831 N 0.872
TRE_0000996201 Trichobilharzia regenti TRE_0000996201 N 0.870
TsM_001062800 Taenia solium TsM_001062800 N 0.870
TTAC_0000422401 Hydatigera taeniaeformis TTAC_0000422401 N 0.870
TTAC_0001051901 Hydatigera taeniaeformis TTAC_0001051901 N 0.870
WUBG_02590 Wuchereria bancrofti WUBG_02590 N 0.849
WUBG_08214 Wuchereria bancrofti WUBG_08214 N 0.863
WUBG_09879 Wuchereria bancrofti WUBG_09879 N 0.854
YQE_06267 Dendroctonus ponderosae YQE_06267 N 0.854
YQE_06271 Dendroctonus ponderosae YQE_06271 N 0.826