CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LDEC002078
(
Leptinotarsa decemlineata
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
LDEC002078
T341236_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC002078-PA
T-box
29
213
FTLQNMDLWRKFHSLGTEMIITKSGRRLFPALNIQVSNLDPKAYYCIWIEMMPSSNCRYKYGNSGGWTPAGTEEAQSPQRVYLHPESPSTGKHWMSQTISFSRLKLTNSTNNDSSTTDQIVLSSMHKYQPRIIIAQTSDATSAMYAPSSSVVFPETEFIAVTAYQNEQVTKLKIDNNPFAKGFRK
Links
Other
T-box
family TFs
Other
Leptinotarsa decemlineata
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29092.m000461
Ricinus communis
29092.m000461
N
evm.TU.supercontig_5.72
Carica papaya
evm.TU.supercontig_5.72
N
GLYMA19G37660
Glycine max
GLYMA19G37660
N
PGSC0003DMG400002710
Solanum tuberosum
PGSC0003DMG400002710
N
POPTR_0008s02580
Populus trichocarpa
POPTR_0008s02580
N
POPTR_0010s24140
Populus trichocarpa
POPTR_0010s24140
N
TCM_022457
Theobroma cacao
TCM_022457
N
Thhalv10013048m.g
Eutrema salsugineum
Thhalv10013048m.g
N
VIT_08s0007g03820
Vitis vinifera
VIT_08s0007g03820
N