L596_g12623 (Steinernema carpocapsae)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 L596_g12623 T341756_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.738 0.670
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.738 0.670
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.738 0.670
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.738 0.665
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.738 0.665
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.738 0.665
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.738 0.665
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.738 0.665
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.738 0.665
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.738 0.665
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.738 0.665
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.738 0.665
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.738 0.665
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.738 0.665
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.738 0.665
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.738 0.665
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.738 0.665
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g12623.t1 T-box 111 301

Links

Other T-box family TFs
Other Steinernema carpocapsae TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL012662 Aedes aegypti AAEL012662 I
AALB000262 Anopheles albimanus AALB000262 I
AARA009464 Anopheles arabiensis AARA009464 I
AATE002862 Anopheles atroparvus AATE002862 I
ACHR010105 Anopheles christyi ACHR010105 I
ACOM040689 Anopheles coluzzii ACOM040689 I
ACUA018540 Anopheles culicifacies ACUA018540 I
ACYPI000273 Acyrthosiphon pisum ACYPI000273 I
ACYPI32959 Acyrthosiphon pisum ACYPI32959 I
ADIR000678 Anopheles dirus ADIR000678 I
AEPI003166 Anopheles epiroticus AEPI003166 I
AFAF012456 Anopheles farauti AFAF012456 I
AFUN009249 Anopheles funestus AFUN009249 I
AGAP028176 Anopheles gambiae AGAP028176 I
AMEC020491 Anopheles melas AMEC020491 I
AMEM000284 Anopheles merus AMEM000284 I
AMIN001682 Anopheles minimus AMIN001682 I
AQUA011502 Anopheles quadriannulatus AQUA011502 I
ASIS012186 Anopheles sinensis ASIS012186 I
ASTEI01901 Anopheles stephensi ASTEI01901 I
BGIBMGA007303 Bombyx mori BGIBMGA007303 I
BGLB006797 Biomphalaria glabrata BGLB006797 I
CapteG206308 Capitella teleta CapteG206308 I
Cflo_05077--XP_624468.1_APIME Camponotus floridanus Cflo_05077--XP_624468.1_APIME I
Cflo_09823--XP_001121050.1_APIME Camponotus floridanus Cflo_09823--XP_001121050.1_APIME I
CGI_10020332 Crassostrea gigas CGI_10020332 I
CLEC008492 Cimex lectularius CLEC008492 I
CLEC012303 Cimex lectularius CLEC012303 I
CPIJ010025 Culex quinquefasciatus CPIJ010025 I
CpipJ_CPIJ010025 Culex pipiens CpipJ_CPIJ010025 I
dimm Drosophila melanogaster FBgn0023091 D
ENSAMXG00000025873 Astyanax mexicanus ENSAMXG00000025873 I
ENSXMAG00000014837 Xiphophorus maculatus ENSXMAG00000014837 I
estExt_fgenesh2_pg.C_2400032 Branchiostoma floridae estExt_fgenesh2_pg.C_2400032 I
GA21247 Drosophila pseudoobscura FBgn0081235 I
GB44356 Apis mellifera GB44356 I
GB47718 Apis mellifera GB47718 I
GD24318 Drosophila simulans FBgn0195665 I
GE12913 Drosophila yakuba FBgn0230628 I
GF14327 Drosophila ananassae FBgn0091354 I
GG21298 Drosophila erecta FBgn0113477 I
GH13314 Drosophila grimshawi FBgn0120790 I
GI12220 Drosophila mojavensis FBgn0134977 I
GK18738 Drosophila willistoni FBgn0220736 I
GL26661 Drosophila persimilis FBgn0164242 I
HHAL006119-PA Halyomorpha halys HHAL006119-PA I
HMEL004962 Heliconius melpomene HMEL004962 I
Hsal_02552--XP_001121050.1_APIME Harpegnathos saltator Hsal_02552--XP_001121050.1_APIME I
Hsal_06132--XP_001121050.1_APIME Harpegnathos saltator Hsal_06132--XP_001121050.1_APIME I
KGM_17543 Danaus plexippus KGM_17543 I
L798_11629 Zootermopsis nevadensis L798_11629 I
L798_12706 Zootermopsis nevadensis L798_12706 I
LCUP013558 Lucilia cuprina LCUP013558 I
LDEC018804 Leptinotarsa decemlineata LDEC018804 I
LotgiG98055 Lottia gigantea LotgiG98055 I
MCINX009496 Melitaea cinxia MCINX009496 I
MDOA007359 Musca domestica MDOA007359 I
MESCA005415 Megaselia scalaris MESCA005415 I
NV10548 Nasonia vitripennis NV10548 I
NV21702 Nasonia vitripennis NV21702 I
Ocbimv22004730m.g Octopus bimaculoides Ocbimv22004730m.g I
PHUM567140 Pediculus humanus PHUM567140 I
RPRC000986 Rhodnius prolixus RPRC000986 I
Sakowv30016776m.g Saccoglossus kowalevskii Sakowv30016776m.g I
SINV24225 Solenopsis invicta SINV24225 I
SMAR011224 Strigamia maritima SMAR011224 I
TC006222 Tribolium castaneum TC006222 I
tetur09g04370 Tetranychus urticae tetur09g04370 I
YQE_07035 Dendroctonus ponderosae YQE_07035 I