AMTR_s00064p00125250 (Amborella trichopoda)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 AMTR_s00064p00125250 T342128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.862 0.862
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.862 0.862
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.862 0.862
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.844 0.844
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.844 0.844
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.844 0.844
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.844 0.844
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.844 0.844
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.844 0.844
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.844 0.844
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.844 0.844
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.844 0.844
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.844 0.844
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN19789 TBP 22 104
ERN19789 TBP 112 195

Links

Other TBP family TFs
Other Amborella trichopoda TFs

756 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04375.1 Alternaria brassicicola AB04375.1 I
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I
AOL_s00054g326 Arthrobotrys oligospora AOL_s00054g326 I
ATEG_03075 Aspergillus terreus CADATEAG00010055 I
AUEXF2481DRAFT_4398 Aureobasidium subglaciale AUEXF2481DRAFT_4398 I
BAUCODRAFT_144230 Baudoinia compniacensis BAUCODRAFT_144230 I
Bcin10g03410 Botrytis cinerea Bcin10g03410 I
CFIO01_11469 Colletotrichum fioriniae CFIO01_11469 I
CGGC5_5606 Colletotrichum gloeosporioides CGGC5_5606 I
CHGG_02890 Chaetomium globosum CHGG_02890 I
CIMG_03917 Coccidioides immitis CIMG_03917 I
CMQ_7525 Grosmannia clavigera CMQ_7525 N
Cob_12532 Colletotrichum orbiculare Cob_12532 I
COCC4DRAFT_126547 Bipolaris maydis COCC4DRAFT_126547 I
COCCADRAFT_37717 Bipolaris zeicola COCCADRAFT_37717 I
COCMIDRAFT_84665 Bipolaris oryzae COCMIDRAFT_84665 I
COCSADRAFT_102727 Bipolaris sorokiniana COCSADRAFT_102727 I
COCVIDRAFT_34345 Bipolaris victoriae COCVIDRAFT_34345 I
CPC735_004330 Coccidioides posadasii CPC735_004330 I
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I
DOTSEDRAFT_68166 Dothistroma septosporum DOTSEDRAFT_68166 I
DRE_01415 Drechslerella stenobrocha DRE_01415 I
EPUS_04985 Endocarpon pusillum EPUS_04985 I
estExt_Genewise1.C_50564 Neurospora discreta estExt_Genewise1.C_50564 I
EURHEDRAFT_458005 Aspergillus ruber EURHEDRAFT_458005 I
e_gw1.00129.236.1 Aspergillus carbonarius e_gw1.00129.236.1 I
F503_07914 Ophiostoma piceae uamh F503_07914 I
fgenesh1_pg.C_scaffold_1000989 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000989 I
GLRG_03674 Colletotrichum graminicola GLRG_03674 I
H072_1719 Dactylellina haptotyla H072_1719 I
H101_07436 Trichophyton interdigitale H101_07436 N
H102_07847 Trichophyton rubrum H102_07847 N
H105_07872 Trichophyton soudanense H105_07872 N
HCBG_06971 Histoplasma capsulatum HCBG_06971 I
HMPREF1541_09623 Cyphellophora europaea HMPREF1541_09623 N
HMPREF1624_06509 Sporothrix schenckii HMPREF1624_06509 N
LEMA_P018010.1 Leptosphaeria maculans LEMA_P018010.1 I
M437DRAFT_83473 Aureobasidium melanogenum M437DRAFT_83473 I
M438DRAFT_281095 Aureobasidium pullulans M438DRAFT_281095 I
MAJ_01159 Metarhizium majus MAJ_01159 N
MCYG_00903 Arthroderma otae MCYG_00903 I
MCYG_00903 Microsporum canis MCYG_00903 I
MGG_13165 Magnaporthe oryzae MGG_13165 N
MGU_01854 Metarhizium guizhouense MGU_01854 N
MPH_05713 Macrophomina phaseolina MPH_05713 I
MYCFIDRAFT_97410 Pseudocercospora fijiensis MYCFIDRAFT_97410 N
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I
NCU00392 Neurospora crassa NCU00392 D
NEUTE1DRAFT_137852 Neurospora tetrasperma NEUTE1DRAFT_137852 I
NFIA_019220 Neosartorya fischeri CADNFIAG00000884 I
OIDMADRAFT_60194 Oidiodendron maius OIDMADRAFT_60194 I
PAAG_08645 Paracoccidioides sp lutzii PAAG_08645 I
Pc18g02200 Penicillium chrysogenum Pc18g02200 I
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I
PDE_02765 Penicillium oxalicum PDE_02765 I
PDIP_73930 Penicillium digitatum PDIP_73930 I
PEX1_076370 Penicillium expansum PEX1_076370 I
PFICI_03782 Pestalotiopsis fici PFICI_03782 I
PITC_027910 Penicillium italicum PITC_027910 I
PMAA_024740 Penicillium marneffei PMAA_024740 I
PMAA_024740 Talaromyces marneffei PMAA_024740 I
PODANS_7_2090 Podospora anserina PODANS_7_2090 I
PTRG_00243 Pyrenophora triticirepentis PTRG_00243 I
PTT_13020 Pyrenophora teres PTT_13020 I
PV09_02665 Verruconis gallopava PV09_02665 I
PVAR5_6448 Byssochlamys spectabilis PVAR5_6448 I
SAPIO_CDS5850 Scedosporium apiospermum SAPIO_CDS5850 I
SBOR_2000 Sclerotinia borealis SBOR_2000 I
SEPMUDRAFT_146146 Sphaerulina musiva SEPMUDRAFT_146146 N
SETTUDRAFT_102560 Setosphaeria turcica SETTUDRAFT_102560 I
SMAC_08830 Sordaria macrospora SMAC_08830 I
SNOG_11811 Phaeosphaeria nodorum SNOG_11811 I
SPBR_00313 Sporothrix brasiliensis SPBR_00313 N
SS1G_06977 Sclerotinia sclerotiorum SS1G_06977 I
TEQG_01462 Trichophyton equinum TEQG_01462 N
THITE_2119520 Thielavia terrestris THITE_2119520 I
TSTA_033430 Talaromyces stipitatus TSTA_033430 I
U727_00431293291 Penicillium solitum U727_00431293291 I
UCRNP2_6191 Neofusicoccum parvum UCRNP2_6191 I
VDAG_06431 Verticillium dahliae VDAG_06431 I
W97_02650 Coniosporium apollinis W97_02650 I