Bo8g114190 (Brassica oleracea)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 Bo8g114190 T342160_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.779 0.779
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.779 0.779
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.779 0.779
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.759 0.759
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.759 0.759
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.759 0.759
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.759 0.759
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.759 0.759
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.759 0.759
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.759 0.759
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.759 0.759
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.759 0.759
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g114190.1 TBP 23 83
Bo8g114190.1 TBP 90 179

Links

Other TBP family TFs
Other Brassica oleracea TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIBMGA011419 Bombyx mori BGIBMGA011419 I
CBG04311 Caenorhabditis briggsae CBG04311 I
CBN12606 Caenorhabditis brenneri CBN12606 I
CBN19589 Caenorhabditis brenneri CBN19589 I
CG42741 Drosophila melanogaster FBgn0261705 D
CGI_10021556 Crassostrea gigas CGI_10021556 I
CJA34076 Caenorhabditis japonica CJA34076 I
CRE26517 Caenorhabditis remanei CRE26517 I
DAPPUDRAFT_27999 Daphnia pulex DAPPUDRAFT_27999 I
ENSCSAVG00000009966 Ciona savignyi ENSCSAVG00000009966 I
GA22108 Drosophila pseudoobscura FBgn0064422 I
GD25089 Drosophila simulans FBgn0196401 I
GE11614 Drosophila yakuba FBgn0229413 I
GF11307 Drosophila ananassae FBgn0088347 I
GG20076 Drosophila erecta FBgn0112270 I
GH20915 Drosophila grimshawi FBgn0128377 I
GI18350 Drosophila mojavensis FBgn0141089 I
GJ20749 Drosophila virilis FBgn0207886 I
GK19604 Drosophila willistoni FBgn0221602 I
GL10855 Drosophila persimilis FBgn0148465 I
GM15591 Drosophila sechellia FBgn0170509 I
klf-3 Caenorhabditis elegans WBGene00003480 D
klf2 Ciona intestinalis ENSCING00000014590 I
LCUP006184 Lucilia cuprina LCUP006184 I
LLOJ006638 Lutzomyia longipalpis LLOJ006638 I
LotgiG122963 Lottia gigantea LotgiG122963 I
MCINX007305 Melitaea cinxia MCINX007305 I
MDOA005423 Musca domestica MDOA005423 I
nDi.2.2.2.g06335 Dirofilaria immitis nDi.2.2.2.g06335 I
NEMVEDRAFT_v1g147359 Nematostella vectensis NEMVEDRAFT_v1g147359 I
NEMVEDRAFT_v1g229565 Nematostella vectensis NEMVEDRAFT_v1g229565 I
NEMVEDRAFT_v1g83807 Nematostella vectensis NEMVEDRAFT_v1g83807 I
Ocbimv22021426m.g Octopus bimaculoides Ocbimv22021426m.g I
SSLN_0001917701 Schistocephalus solidus SSLN_0001917701 I
TCLT_0000664101 Thelazia callipaeda TCLT_0000664101 I
tetur01g01330 Tetranychus urticae tetur01g01330 I