TBP (Pteropus vampyrus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSPVAG00000010820 T342414_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		1.000 1.000
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		1.000 1.000
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		1.000 1.000
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		1.000 1.000
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		1.000 1.000
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		1.000 1.000
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		1.000 1.000
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		1.000 1.000
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		1.000 1.000
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		1.000 1.000
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.808 0.808
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.808 0.808
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000010195 TBP 160 242
ENSPVAP00000010195 TBP 250 333

Links

Other TBP family TFs
Other Pteropus vampyrus TFs

773 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_13012 Cicer arietinum Ca_13012 N
Cla019261 Citrullus lanatus Cla019261 N
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I
gene25163-v1.0-hybrid Fragaria vesca gene25163-v1.0-hybrid I
GLYMA05G35090 Glycine max GLYMA05G35090 N
GLYMA07G10240 Glycine max GLYMA07G10240 I
GLYMA08G04610 Glycine max GLYMA08G04610 N
GLYMA09G31650 Glycine max GLYMA09G31650 N
MDP0000153949 Malus domestica MDP0000153949 I
MDP0000246482 Malus domestica MDP0000246482 I
MTR_6g084430 Medicago truncatula MTR_6g084430 N
PRUPE_ppa007839mg Prunus persica PRUPE_ppa007839mg I