trf3 (Takifugu rubripes)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSTRUG00000009283 T342444_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.946 0.946
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.946 0.946
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.946 0.946
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.946 0.946
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.946 0.946
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.946 0.946
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.946 0.946
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.946 0.946
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.946 0.946
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.946 0.946
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.790 0.790
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.790 0.790
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023338 TBP 146 228
ENSTRUP00000023338 TBP 236 319
ENSTRUP00000023339 TBP 136 218
ENSTRUP00000023339 TBP 226 309
ENSTRUP00000023340 TBP 146 228
ENSTRUP00000023340 TBP 236 319

Links

Other TBP family TFs
Other Takifugu rubripes TFs

786 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_180216 Agaricus bisporus AGABI2DRAFT_180216 N
AWRI1499_4487 Brettanomyces bruxellensis AWRI1499_4487 I
e_gw1.7.455.1 Tremella mesenterica e_gw1.7.455.1 N
FOMPIDRAFT_39384 Fomitopsis pinicola FOMPIDRAFT_39384 N
gw1.1.808.1 Phycomyces blakesleeanus gw1.1.808.1 N
gw1.4.1763.1 Mucor circinelloides gw1.4.1763.1 N
gw1.6.1266.1 Mucor circinelloides gw1.6.1266.1 N
KUCA_T00000816001 Kuraishia capsulata KUCA_T00000816001 I
M422DRAFT_127323 Sphaerobolus stellatus M422DRAFT_127323 N
PDIP_53990 Penicillium digitatum PDIP_53990 N
PILCRDRAFT_36344 Piloderma croceum PILCRDRAFT_36344 N
PLEOSDRAFT_18759 Pleurotus ostreatus PLEOSDRAFT_18759 N
SERLA73DRAFT_17521 Serpula lacrymans SERLA73DRAFT_17521 N
THOM_2765 Trachipleistophora hominis THOM_2765 N
UV8b_7728 Ustilaginoidea virens UV8b_7728 N
VCUG_02591 Vavraia culicis VCUG_02591 N
VICG_01897 Vittaforma corneae VICG_01897 N