GLYMA18G44460 (Glycine max)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 GLYMA18G44460 T342575_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.862 0.862
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.862 0.862
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.862 0.862
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.832 0.832
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.832 0.832
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.832 0.832
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.832 0.832
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.832 0.832
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.832 0.832
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.832 0.832
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.832 0.832
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.832 0.832
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.832 0.832
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G44460.1 TBP 22 104
GLYMA18G44460.1 TBP 112 195

Links

Other TBP family TFs
Other Glycine max TFs

751 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_201123 Agaricus bisporus AGABI2DRAFT_201123 N
BOTBODRAFT_349070 Botryobasidium botryosum BOTBODRAFT_349070 N
BOTBODRAFT_50643 Botryobasidium botryosum BOTBODRAFT_50643 N
CY34DRAFT_802736 Suillus luteus CY34DRAFT_802736 N
GALMADRAFT_481013 Galerina marginata GALMADRAFT_481013 N
GYMLUDRAFT_41790 Gymnopus luxurians GYMLUDRAFT_41790 N
JAAARDRAFT_72641 Jaapia argillacea JAAARDRAFT_72641 N
K443DRAFT_670931 Laccaria amethystina K443DRAFT_670931 N
M378DRAFT_9274 Amanita muscaria M378DRAFT_9274 N
M404DRAFT_118248 Pisolithus tinctorius M404DRAFT_118248 N
M407DRAFT_127717 Tulasnella calospora M407DRAFT_127717 N
M413DRAFT_180130 Hebeloma cylindrosporum M413DRAFT_180130 N
Moror_14481 Moniliophthora roreri Moror_14481 N
PAXINDRAFT_169835 Paxillus involutus PAXINDRAFT_169835 N
PAXRUDRAFT_15381 Paxillus rubicundulus PAXRUDRAFT_15381 N
PILCRDRAFT_227592 Piloderma croceum PILCRDRAFT_227592 N
PILCRDRAFT_818762 Piloderma croceum PILCRDRAFT_818762 N
PISMIDRAFT_677624 Pisolithus microcarpus PISMIDRAFT_677624 N
SCHCODRAFT_82290 Schizophyllum commune SCHCODRAFT_82290 N
V565_042130 Rhizoctonia solani V565_042130 N