NCER_102344 (Nosema ceranae)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 NCER_102344 T342740_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.790 0.790
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.790 0.790
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.790 0.790
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.760 0.760
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.760 0.760
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.760 0.760
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.760 0.760
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.760 0.760
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.760 0.760
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.760 0.760
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.760 0.760
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.760 0.760
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.760 0.760
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEQ81295 TBP 23 105
EEQ81295 TBP 113 196

Links

Other TBP family TFs
Other Nosema ceranae TFs

688 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001368 Oryza indica BGIOSGA001368 N
BGIOSGA001369 Oryza indica BGIOSGA001369 N
BGIOSGA003810 Oryza indica BGIOSGA003810 N
OBART01G20230 Oryza barthii OBART01G20230 N
OBART01G20240 Oryza barthii OBART01G20240 N
OGLUM01G23830 Oryza glumaepatula OGLUM01G23830 N
OMERI01G18670 Oryza meridionalis OMERI01G18670 N
ONIVA01G22650 Oryza nivara ONIVA01G22650 N
ONIVA01G22790 Oryza nivara ONIVA01G22790 N
ORGLA01G0167400 Oryza glaberrima ORGLA01G0167400 N
ORUFI01G22650 Oryza rufipogon ORUFI01G22650 N
ORUFI01G22810 Oryza rufipogon ORUFI01G22810 N
OS01G0571800 Oryza sativa OS01G0571800 N