PLEOSDRAFT_1023395 (Pleurotus ostreatus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 PLEOSDRAFT_1023395 T342833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.889 0.889
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.889 0.889
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.889 0.889
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.830 0.830
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.830 0.830
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.830 0.830
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.830 0.830
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.830 0.830
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.830 0.830
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.830 0.830
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.830 0.830
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.830 0.830
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.830 0.830
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ33942 TBP 22 104
KDQ33942 TBP 112 181

Links

Other TBP family TFs
Other Pleurotus ostreatus TFs

745 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29950.m001154 Ricinus communis 29950.m001154 I 0.796
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I 0.796
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.802
BGIOSGA037671 Oryza indica BGIOSGA037671 I 0.790
Bo3g185290 Brassica oleracea Bo3g185290 I 0.856
Bo5g132530 Brassica oleracea Bo5g132530 I 0.784
Bo6g051360 Brassica oleracea Bo6g051360 I 0.863
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I 0.856
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.863
Bra011920 Brassica rapa Bra011920 I 0.790
Bra027434 Brassica rapa Bra027434 I 0.784
Bra030855 Brassica rapa Bra030855 I 0.856
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I 0.796
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I 0.863
Brh_R009637 Buceros rhinoceros Brh_R009637 I 0.720
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.863
Cagra.0690s0017 Capsella grandiflora Cagra.0690s0017 I 0.784
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.863
Carubv10014676m.g Capsella rubella Carubv10014676m.g I 0.784
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.796
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.796
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.796
Cucsa.142180 Cucumis sativus Cucsa.142180 I 0.802
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I 0.784
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I 0.887
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I 0.790
e_gw1.13.259.1 Physcomitrella patens e_gw1.13.259.1 I 0.796
F775_26897 Aegilops tauschii F775_26897 I 0.776
GLYMA03G04500 Glycine max GLYMA03G04500 I 0.814
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.796
GLYMA16G25450 Glycine max GLYMA16G25450 I 0.848
GLYMA18G44460 Glycine max GLYMA18G44460 I 0.790
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.790
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.885
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.863
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.856
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.876
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.843
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I 0.790
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I 0.790
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I 0.790
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.808
LPERR12G14180 Leersia perrieri LPERR12G14180 I 0.802
Lus10002634.g Linum usitatissimum Lus10002634.g I 0.802
Lus10020260.g Linum usitatissimum Lus10020260.g I 0.802
mgf009543m Mimulus guttatus mgf009543m I 0.869
mgf012506m Mimulus guttatus mgf012506m I 0.795
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.837
MLOC_44969 Hordeum vulgare MLOC_44969 I 0.796
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.796
OB03G33300 Oryza brachyantha OB03G33300 I 0.802
OBART03G28150 Oryza barthii OBART03G28150 I 0.796
OBART12G16890 Oryza barthii OBART12G16890 I 0.796
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I 0.796
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I 0.796
OMERI03G24790 Oryza meridionalis OMERI03G24790 I 0.796
OMERI11G15350 Oryza meridionalis OMERI11G15350 I 0.796
ONIVA03G29180 Oryza nivara ONIVA03G29180 I 0.796
ONIVA12G15220 Oryza nivara ONIVA12G15220 I 0.782
OPUNC03G25660 Oryza punctata OPUNC03G25660 I 0.796
OPUNC12G15370 Oryza punctata OPUNC12G15370 I 0.796
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I 0.796
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I 0.796
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I 0.782
OS12G0580300 Oryza sativa OS12G0580300 I 0.796
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I 0.796
PK11932.1 Cannabis sativa PK11932.1 I 0.814
PK25605.1 Cannabis sativa PK25605.1 I 0.867
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I 0.790
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.856
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I 0.802
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.856
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.824
Sb01g012880 Sorghum bicolor Sb01g012880 I 0.802
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.876
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I 0.790
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I 0.790
Si023295m.g Setaria italica Si023295m.g I 0.856
Si038805m.g Setaria italica Si038805m.g I 0.802
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I 0.790
TBP1 Arabidopsis thaliana AT3G13445 I 0.810
TBP1 Arabidopsis lyrata fgenesh2_kg.3__1428__AT3G13445.1 I 0.784
TBP2 Arabidopsis thaliana AT1G55520 I 0.863
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I 0.863
TBP2 Oryza sativa OS03G0657000 I 0.796
TCM_001402 Theobroma cacao TCM_001402 I
TCM_001404 Theobroma cacao TCM_001404 N
TCM_026453 Theobroma cacao TCM_026453 I 0.777
Thhalv10011790m.g Eutrema salsugineum Thhalv10011790m.g I 0.790
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.850
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I 0.796
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I 0.796
TRIUR3_20012 Triticum urartu TRIUR3_20012 I 0.776
VIT_06s0004g00180 Vitis vinifera VIT_06s0004g00180 I 0.802