PRUPE_ppa016974mg (Prunus persica)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 PRUPE_ppa016974mg T342844_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.733 0.733
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.733 0.733
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.733 0.733
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.702 0.702
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.702 0.702
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.702 0.702
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.702 0.702
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.702 0.702
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.702 0.702
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.702 0.702
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.702 0.702
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.702 0.702
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ05748 TBP 1 61
EMJ05748 TBP 62 131

Links

Other TBP family TFs
Other Prunus persica TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA009202 Oryza indica BGIOSGA009202 N
Cagra.2428s0008 Capsella grandiflora Cagra.2428s0008 N
Cucsa.140430 Cucumis sativus Cucsa.140430 N
F775_14547 Aegilops tauschii F775_14547 N
F775_20324 Aegilops tauschii F775_20324 N
GLYMA14G09231 Glycine max GLYMA14G09231 I
GLYMA17G21573 Glycine max GLYMA17G21573 I
GRMZM2G316758 Zea mays GRMZM2G316758 N
GSMUA_Achr9G11300_001 Musa acuminata GSMUA_Achr9G11300_001 N
LjSGA_050347.1 Lotus japonicus LjSGA_050347.1 N
Lus10018724.g Linum usitatissimum Lus10018724.g N
Lus10036286.g Linum usitatissimum Lus10036286.g N
mgf017216m Mimulus guttatus mgf017216m N
mgf025738m Mimulus guttatus mgf025738m N
OB02G42630 Oryza brachyantha OB02G42630 N
OB12G25120 Oryza brachyantha OB12G25120 N
OBART02G35840 Oryza barthii OBART02G35840 N
OGLUM03G27730 Oryza glumaepatula OGLUM03G27730 I
OGLUM05G02640 Oryza glumaepatula OGLUM05G02640 I
OLONG_003839 Oryza longistaminata OLONG_003839 N
OLONG_008235 Oryza longistaminata OLONG_008235 N
OLONG_013198 Oryza longistaminata OLONG_013198 I
OLONG_016548 Oryza longistaminata OLONG_016548 N
OMERI05G02570 Oryza meridionalis OMERI05G02570 I
ONIVA10G20730 Oryza nivara ONIVA10G20730 N
OPUNC01G09800 Oryza punctata OPUNC01G09800 N
OPUNC02G33030 Oryza punctata OPUNC02G33030 N
OPUNC06G04110 Oryza punctata OPUNC06G04110 N
OPUNC09G08950 Oryza punctata OPUNC09G08950 N
ORGLA03G0340500 Oryza glaberrima ORGLA03G0340500 N
ORGLA05G0025000 Oryza glaberrima ORGLA05G0025000 N
ORUFI10G19390 Oryza rufipogon ORUFI10G19390 N
Pavir.Ca01237 Panicum virgatum Pavir.Ca01237 I
Pavir.J12143 Panicum virgatum Pavir.J12143 I
PDK_20s1361701g002 Phoenix dactylifera PDK_20s1361701g002 N
PDK_20s1580651g003 Phoenix dactylifera PDK_20s1580651g003 N
Pm005303 Prunus mume Pm005303 N
Traes_5AL_F6FD8FEFF Triticum aestivum Traes_5AL_F6FD8FEFF N
Traes_6AS_E0A257EEA Triticum aestivum Traes_6AS_E0A257EEA N
TRIUR3_21181 Triticum urartu TRIUR3_21181 N
TRIUR3_25332 Triticum urartu TRIUR3_25332 N
TRIUR3_26354 Triticum urartu TRIUR3_26354 N