e_gw1.5.392.1 (Chlorella NC64A)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 e_gw1.5.392.1 T343109_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.802 0.802
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.802 0.802
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.802 0.802
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.802 0.802
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.802 0.802
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.802 0.802
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.802 0.802
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.802 0.802
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.802 0.802
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.802 0.802
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.790 0.790
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.790 0.790
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.5.392.1 TBP 28 110
e_gw1.5.392.1 TBP 118 201

Links

Other TBP family TFs
Other Chlorella NC64A TFs

732 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008738 Calypte anna Aan_R008738 N
Afo_R010661 Aptenodytes forsteri Afo_R010661 N
ahr2 Danio rerio ENSDARG00000021833 N
ahr2 Tetraodon nigroviridis ENSTNIG00000017165 N
ahr2a Takifugu rubripes ENSTRUG00000009303 N
ahrr Takifugu rubripes ENSTRUG00000003745 N
ENSAPLG00000003921 Anas platyrhynchos ENSAPLG00000003921 N
ENSFALG00000003870 Ficedula albicollis ENSFALG00000003870 N
ENSGMOG00000004709 Gadus morhua ENSGMOG00000004709 N
ENSLACG00000012651 Latimeria chalumnae ENSLACG00000012651 N
ENSLOCG00000013271 Lepisosteus oculatus ENSLOCG00000013271 N
ENSOCUG00000028055 Oryctolagus cuniculus ENSOCUG00000028055 N
ENSONIG00000010232 Oreochromis niloticus ENSONIG00000010232 N
ENSOPRG00000010358 Ochotona princeps ENSOPRG00000010358 I
ENSORLG00000018196 Oryzias latipes ENSORLG00000018196 N
ENSXMAG00000005053 Xiphophorus maculatus ENSXMAG00000005053 N
Pvit_18498 Pogona vitticeps Pvit_18498 N