tbp (Xenopus tropicalis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 XB-GENE-488470 T343258_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		1.000 1.000
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		1.000 1.000
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		1.000 1.000
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		1.000 1.000
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		1.000 1.000
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		1.000 1.000
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		1.000 1.000
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		1.000 1.000
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		1.000 1.000
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		1.000 1.000
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.808 0.808
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.808 0.808
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI60510 TBP 120 202
AAI60510 TBP 210 293
AAI71174 TBP 120 202
AAI71174 TBP 210 293
AAI71176 TBP 120 202
AAI71176 TBP 210 293
CAJ83650 TBP 120 202
CAJ83650 TBP 210 293

Links

Other TBP family TFs
Other Xenopus tropicalis TFs

774 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_01923 Capronia epimyces A1O3_01923 N
ACLA_039280 Aspergillus clavatus CADACLAG00003549 N
AFUA_3G11380 Aspergillus fumigatus CADAFUAG00005326 N
ANIA_02905 Aspergillus nidulans CADANIAG00010184 N
ARB_02044 Arthroderma benhamiae ARB_02044 N
ATEG_04673 Aspergillus terreus CADATEAG00009625 N
BDDG_06367 Blastomyces dermatitidis BDDG_06367 N
CADANGAG00002230 Aspergillus niger CADANGAG00002230 N
CADAORAG00001291 Aspergillus oryzae CADAORAG00001291 N
CIMG_03690 Coccidioides immitis CIMG_03690 N
CPC735_005930 Coccidioides posadasii CPC735_005930 N
CTHT_0020070 Chaetomium thermophilum CTHT_0020070 N
EPUS_07916 Endocarpon pusillum EPUS_07916 N
EURHEDRAFT_403202 Aspergillus ruber EURHEDRAFT_403202 N
fgenesh1_pg.00866_#_396 Aspergillus carbonarius fgenesh1_pg.00866_#_396 N
H101_05877 Trichophyton interdigitale H101_05877 N
H102_07559 Trichophyton rubrum H102_07559 N
H105_07586 Trichophyton soudanense H105_07586 N
HCBG_06782 Histoplasma capsulatum HCBG_06782 N
HMPREF1120_06729 Exophiala dermatitidis HMPREF1120_06729 N
HMPREF1541_01688 Cyphellophora europaea HMPREF1541_01688 N
MCYG_00625 Microsporum canis MCYG_00625 N
MCYG_00625 Arthroderma otae MCYG_00625 N
MGYG_01337 Microsporum gypseum MGYG_01337 N
MPH_12253 Macrophomina phaseolina MPH_12253 N
NCU05891 Neurospora crassa NCU05891 N
NEUTE1DRAFT_86802 Neurospora tetrasperma NEUTE1DRAFT_86802 N
NFIA_065920 Neosartorya fischeri CADNFIAG00005868 N
OIDMADRAFT_162843 Oidiodendron maius OIDMADRAFT_162843 N
PAAG_01959 Paracoccidioides sp lutzii PAAG_01959 N
PABG_02226 Paracoccidioides brasiliensis PABG_02226 N
Pc13g09650 Penicillium chrysogenum Pc13g09650 N
PCH_Pc13g09650 Penicillium rubens PCH_Pc13g09650 N
PDE_04763 Penicillium oxalicum PDE_04763 N
PDIP_29650 Penicillium digitatum PDIP_29650 N
PEX1_044080 Penicillium expansum PEX1_044080 N
PITC_061280 Penicillium italicum PITC_061280 N
PMAA_019260 Penicillium marneffei PMAA_019260 N
PMAA_019260 Talaromyces marneffei PMAA_019260 N
PNEG_03153 Pneumocystis murina PNEG_03153 N
PredSwiss_ASS2010_3776.1 Pneumocystis carinii PredSwiss_ASS2010_3776.1 N
PredSwiss_CON2738.2 Pneumocystis carinii PredSwiss_CON2738.2 N
PredSwiss_CON3214.2 Pneumocystis carinii PredSwiss_CON3214.2 N
PredSwiss_CON858.1 Pneumocystis carinii PredSwiss_CON858.1 N
PredSwiss_EST252.1 Pneumocystis carinii PredSwiss_EST252.1 N
PV06_04366 Exophiala oligosperma PV06_04366 N
PV08_10257 Exophiala spinifera PV08_10257 N
PV11_05007 Exophiala sideris PV11_05007 N
PVAR5_7731 Byssochlamys spectabilis PVAR5_7731 N
SNOG_12221 Stagonospora nodorum SNOG_12221 N
SNOG_12221 Phaeosphaeria nodorum SNOG_12221 N
TEQG_05494 Trichophyton equinum TEQG_05494 N
TESG_05752 Trichophyton tonsurans TESG_05752 N
THITE_2067650 Thielavia terrestris THITE_2067650 N
TRV_05872 Trichophyton verrucosum TRV_05872 N
TSTA_027260 Talaromyces stipitatus TSTA_027260 N
U727_00433320441 Penicillium solitum U727_00433320441 N
UREG_07450 Uncinocarpus reesii UREG_07450 N
W97_06147 Coniosporium apollinis W97_06147 N