CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0000675601
(
Heligmosomoides bakeri
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
HPBE_0000675601
T343497_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0000675601-mRNA-1
TBP
26
107
SFQIRNVVCNYTLPLHIDLRKLALNSNNVTFDRGRGVLLKQKRKPNCYVKIYSSGKVYIVGCKSEADCMVAARTIARRVQKT
HPBE_0000675601-mRNA-1
TBP
119
202
NYKVCNVLATCRMPFGIKIEELAQQYPAQSQYEPELSVGLVWRSQDPKATLRIHTTGSITVTGASSEHDVMRSIEMMYPIVRKF
Links
Other
TBP
family TFs
Other
Heligmosomoides bakeri
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G20547
Brachypodium distachyon
BRADI4G20547
N
BRADI4G23227
Brachypodium distachyon
BRADI4G23227
N
F775_06631
Aegilops tauschii
F775_06631
N
F775_12825
Aegilops tauschii
F775_12825
N
F775_14257
Aegilops tauschii
F775_14257
N
TRAES3BF181700010CFD_g
Triticum aestivum
TRAES3BF181700010CFD_g
N
Traes_1AL_C6CACDF78
Triticum aestivum
Traes_1AL_C6CACDF78
N
Traes_1BS_613E9DBA6
Triticum aestivum
Traes_1BS_613E9DBA6
N
Traes_1DL_0CDB6989D
Triticum aestivum
Traes_1DL_0CDB6989D
N
Traes_2BS_0D569FC2A
Triticum aestivum
Traes_2BS_0D569FC2A
N
Traes_5AL_DB9E0AA8D
Triticum aestivum
Traes_5AL_DB9E0AA8D
N
Traes_5DL_A9969D596
Triticum aestivum
Traes_5DL_A9969D596
N
Traes_6AS_073DEE100
Triticum aestivum
Traes_6AS_073DEE100
N
Traes_6BL_A62A29F7B
Triticum aestivum
Traes_6BL_A62A29F7B
N
Traes_6BS_276ACF176
Triticum aestivum
Traes_6BS_276ACF176
N
Traes_6BS_938E60C80
Triticum aestivum
Traes_6BS_938E60C80
N
Traes_6BS_945FD8DAC1
Triticum aestivum
Traes_6BS_945FD8DAC1
N
Traes_6BS_9FAF15CD0
Triticum aestivum
Traes_6BS_9FAF15CD0
N
Traes_6BS_B8A0BF56F
Triticum aestivum
Traes_6BS_B8A0BF56F
N
Traes_6BS_C3247654A
Triticum aestivum
Traes_6BS_C3247654A
N
Traes_6BS_EE1BBAFD1
Triticum aestivum
Traes_6BS_EE1BBAFD1
N
Traes_6DS_3A1EA267A
Triticum aestivum
Traes_6DS_3A1EA267A
N
Traes_6DS_B498AFDCA
Triticum aestivum
Traes_6DS_B498AFDCA
N
Traes_7DS_6B1F6F5E5
Triticum aestivum
Traes_7DS_6B1F6F5E5
N
TRIUR3_06344
Triticum urartu
TRIUR3_06344
N