PTRK_0001233700 (Parastrongyloides trichosuri)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 PTRK_0001233700 T343583_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.819 0.819
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.819 0.819
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.819 0.819
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.819 0.819
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.819 0.819
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.819 0.819
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.819 0.819
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.819 0.819
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.819 0.819
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.819 0.819
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.771 0.771
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.771 0.771
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0001233700.1 TBP 156 237
PTRK_0001233700.1 TBP 245 328

Links

Other TBP family TFs
Other Parastrongyloides trichosuri TFs

739 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG012491.1 Alligator sinensis Alligator_sinensis_CCG012491.1 N
Cmyd_10013609 Chelonia mydas Cmyd_10013609 N
ENSAMEG00000013487 Ailuropoda melanoleuca ENSAMEG00000013487 N
ENSAPLG00000010584 Anas platyrhynchos ENSAPLG00000010584 N
ENSBTAP00000025518-D1 Bos grunniens ENSBTAP00000025518-D1 N
ENSCSAG00000017122 Chlorocebus sabaeus ENSCSAG00000017122 N
ENSFALG00000011037 Ficedula albicollis ENSFALG00000011037 N
ENSGALG00000027434 Gallus gallus ENSGALG00000027434 N
ENSLACG00000017953 Latimeria chalumnae ENSLACG00000017953 N
ENSLOCG00000014332 Lepisosteus oculatus ENSLOCG00000014332 N
ENSMEUG00000014197 Macropus eugenii ENSMEUG00000014197 N
ENSMLUG00000002963 Myotis lucifugus ENSMLUG00000002963 N
ENSMPUG00000015742 Mustela putorius furo ENSMPUG00000015742 N
ENSNLEG00000011807 Nomascus leucogenys ENSNLEG00000011807 N
ENSOARG00000011959 Ovis aries ENSOARG00000011959 N
ENSP00000268154 Macaca fascicularis ENSP00000268154 N
ENSPANG00000021467 Papio anubis ENSPANG00000021467 N
ENSSHAG00000011785 Sarcophilus harrisii ENSSHAG00000011785 N
ENSSTOG00000029208 Ictidomys tridecemlineatus ENSSTOG00000029208 N
Myotis_brandtii_ZNF710_10004291 Myotis brandtii Myotis_brandtii_ZNF710_10004291 N
Ogr13398 Ophisaurus gracilis Ogr13398 N
Pvit_14028 Pogona vitticeps Pvit_14028 N
Zfp710 Rattus norvegicus ENSRNOG00000014278 N
Zfp710 Mus musculus ENSMUSG00000048897 N
ZNF710 Tursiops truncatus ENSTTRG00000000797 N
ZNF710 Sorex araneus ENSSARG00000010704 N
ZNF710 Sus scrofa ENSSSCG00000021361 N
ZNF710 Procavia capensis ENSPCAG00000007305 N
ZNF710 Cavia porcellus ENSCPOG00000003532 N
ZNF710 Canis familiaris ENSCAFG00000012039 N
ZNF710 Bos taurus ENSBTAG00000019174 N
znf710 Xenopus tropicalis XB-GENE-981399 N
ZNF710 Pteropus vampyrus ENSPVAG00000011824 N
ZNF710 Pan troglodytes ENSPTRG00000007445 N
ZNF710 Homo sapiens ENSG00000140548 N
ZNF710 Otolemur garnettii ENSOGAG00000016446 N
ZNF710 Oryctolagus cuniculus ENSOCUG00000015114 N
ZNF710 Anolis carolinensis ENSACAG00000009870 N
ZNF710 Monodelphis domestica ENSMODG00000019518 N
ZNF710 Macaca mulatta ENSMMUG00000014831 N
ZNF710 Dasypus novemcinctus ENSDNOG00000048028 N
ZNF710 Microcebus murinus ENSMICG00000011530 N
ZNF710 Equus caballus ENSECAG00000023093 N
ZNF710 Echinops telfairi ENSETEG00000007773 N
ZNF710 Loxodonta africana ENSLAFG00000010169 N
ZNF710 Felis catus ENSFCAG00000005268 N
ZNF710 Gorilla gorilla ENSGGOG00000004875 N