BGIOSGA000770 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA000770 T343699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.939 0.508
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.938 0.483
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.930 0.492
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.903 0.508
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.903 0.508
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.415
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.890 0.449
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.890 0.449
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.875 0.390
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.875 0.390
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.875 0.390
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.865 0.390
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.865 0.390
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.865 0.407
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.865 0.390
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.851 0.364
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA000770-PA TCP 54 171

Links

Other TCP family TFs
Other Oryza indica TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_06639 Capronia epimyces A1O3_06639 N 0.000
A1O3_09122 Capronia epimyces A1O3_09122 N 0.000
A1O5_02111 Cladophialophora psammophila A1O5_02111 N 0.000
A1O7_07661 Cladophialophora yegresii A1O7_07661 N 0.000
A1O9_12701 Exophiala aquamarina A1O9_12701 N 0.000
BAUCODRAFT_75640 Baudoinia compniacensis BAUCODRAFT_75640 N 0.000
BBA_08755 Beauveria bassiana BBA_08755 N 0.000
DOTSEDRAFT_71961 Dothistroma septosporum DOTSEDRAFT_71961 N 0.000
G647_02424 Cladophialophora carrionii G647_02424 N 0.000
HMPREF1541_03976 Cyphellophora europaea HMPREF1541_03976 N 0.000
HMPREF1624_01047 Sporothrix schenckii HMPREF1624_01047 N 0.000
HMPREF1624_02633 Sporothrix schenckii HMPREF1624_02633 N 0.000
MAJ_09511 Metarhizium majus MAJ_09511 N 0.000
MBR_10279 Metarhizium brunneum MBR_10279 N 0.000
MGU_07913 Metarhizium guizhouense MGU_07913 N 0.000
MYCFIDRAFT_167080 Pseudocercospora fijiensis MYCFIDRAFT_167080 N 0.000
OIDMADRAFT_44111 Oidiodendron maius OIDMADRAFT_44111 N 0.000
PFICI_03421 Pestalotiopsis fici PFICI_03421 N 0.000
PMAA_082550 Penicillium marneffei PMAA_082550 N 0.000
PMAA_082550 Talaromyces marneffei PMAA_082550 N 0.000
PV04_08134 Capronia semiimmersa PV04_08134 N 0.000
PV05_08566 Exophiala xenobiotica PV05_08566 N 0.000
PV06_09975 Exophiala oligosperma PV06_09975 N 0.000
PV07_11857 Cladophialophora immunda PV07_11857 N 0.000
PV08_08390 Exophiala spinifera PV08_08390 N 0.000
PV09_03952 Verruconis gallopava PV09_03952 N 0.000
PV10_08232 Exophiala mesophila PV10_08232 N 0.000
PV11_06930 Exophiala sideris PV11_06930 N 0.000
SEPMUDRAFT_150769 Sphaerulina musiva SEPMUDRAFT_150769 N 0.000
SPBR_02521 Sporothrix brasiliensis SPBR_02521 N 0.000
SPBR_06706 Sporothrix brasiliensis SPBR_06706 N 0.000
TSTA_117390 Talaromyces stipitatus TSTA_117390 N 0.000
X797_008429 Metarhizium robertsii X797_008429 N 0.000
Z517_03292 Fonsecaea pedrosoi Z517_03292 N 0.000
Z518_06873 Rhinocladiella mackenziei Z518_06873 N 0.000
Z519_01369 Cladophialophora bantiana Z519_01369 N 0.000