GLYMA13G36840 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA13G36840 T343890_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.957 0.653
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.956 0.634
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.956 0.634
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.956 0.634
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.956 0.653
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.938 0.653
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.898 0.495
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.898 0.495
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.898 0.465
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.882 0.475
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.857 0.436
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.845 0.426
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.837 0.426
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.837 0.426
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G36840.2 TCP 22 213
GLYMA13G36840.3 TCP 22 213

Links

Other TCP family TFs
Other Glycine max TFs

427 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000007343 Astyanax mexicanus ENSAMXG00000007343 I 0.000
ENSLACG00000013218 Latimeria chalumnae ENSLACG00000013218 I 0.000
ENSLOCG00000012145 Lepisosteus oculatus ENSLOCG00000012145 I 0.000
ENSONIG00000019306 Oreochromis niloticus ENSONIG00000019306 I 0.000
ENSPFOG00000017022 Poecilia formosa ENSPFOG00000017022 I 0.000
ENSSTOG00000005880 Ictidomys tridecemlineatus ENSSTOG00000005880 N 0.000
ENSXMAG00000003856 Xiphophorus maculatus ENSXMAG00000003856 I 0.000
ML066516a Mnemiopsis leidyi ML066516a N 0.000
NEMVEDRAFT_v1g240998 Nematostella vectensis NEMVEDRAFT_v1g240998 N 0.000
tfeb Danio rerio ENSDARG00000010794 I 0.000
tfeb Oryzias latipes ENSORLG00000015866 I 0.000
tfeb Tetraodon nigroviridis ENSTNIG00000007281 I 0.000
tfeb Takifugu rubripes ENSTRUG00000000653 I 0.000