GSMUA_Achr10G01020_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr10G01020_001 T343946_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.955 0.829
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.954 0.816
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.951 0.789
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.951 0.789
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.951 0.789
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.945 0.829
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.928 0.658
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.919 0.618
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.919 0.618
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.895 0.592
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.857 0.592
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.857 0.592
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.844 0.539
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.837 0.539
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P01020_001 TCP 50 138

Links

Other TCP family TFs
Other Musa acuminata TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BATDEDRAFT_7482 Batrachochytrium dendrobatidis BATDEDRAFT_7482 I
BAUCODRAFT_126300 Baudoinia compniacensis BAUCODRAFT_126300 N
BN946_scf184908.g134 Trametes cinnabarina BN946_scf184908.g134 I
BN946_scf184994.g56 Trametes cinnabarina BN946_scf184994.g56 I
CC1G_00255 Coprinopsis cinerea CC1G_00255 I
CC1G_06994 Coprinopsis cinerea CC1G_06994 I
CERSUDRAFT_118953 Ceriporiopsis subvermispora CERSUDRAFT_118953 N
Cflo_00339--XP_001122996.1_APIME Camponotus floridanus Cflo_00339--XP_001122996.1_APIME I
CY34DRAFT_797588 Suillus luteus CY34DRAFT_797588 I
DACRYDRAFT_31804 Dacryopinax sp DACRYDRAFT_31804 I
E5Q_02264 Mixia osmundae E5Q_02264 N
E5Q_05542 Mixia osmundae E5Q_05542 I
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I
FIBRA_08570 Fibroporia radiculosa FIBRA_08570 I
FOMPIDRAFT_1121239 Fomitopsis pinicola FOMPIDRAFT_1121239 N
FOMPIDRAFT_140591 Fomitopsis pinicola FOMPIDRAFT_140591 I
GALMADRAFT_1187634 Galerina marginata GALMADRAFT_1187634 N
GALMADRAFT_224334 Galerina marginata GALMADRAFT_224334 I
GB41647 Apis mellifera GB41647 I
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N
gwh2.14.289.1 Phanerochaete chrysosporium gwh2.14.289.1 I
GYMLUDRAFT_162520 Gymnopus luxurians GYMLUDRAFT_162520 I
GYMLUDRAFT_71519 Gymnopus luxurians GYMLUDRAFT_71519 I
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N
Hsal_04829--XP_001122996.1_APIME Harpegnathos saltator Hsal_04829--XP_001122996.1_APIME I
LLOJ001028 Lutzomyia longipalpis LLOJ001028 I
M378DRAFT_12668 Amanita muscaria M378DRAFT_12668 N
M404DRAFT_69579 Pisolithus tinctorius M404DRAFT_69579 I
M422DRAFT_121750 Sphaerobolus stellatus M422DRAFT_121750 N
M422DRAFT_126587 Sphaerobolus stellatus M422DRAFT_126587 N
MAC_04576 Metarhizium acridum MAC_04576 I
MAJ_04611 Metarhizium majus MAJ_04611 I
MAM_03716 Metarhizium album MAM_03716 I
MANI_013732 Metarhizium anisopliae MANI_013732 I
MBR_05977 Metarhizium brunneum MBR_05977 I
MGU_06500 Metarhizium guizhouense MGU_06500 I
MVLG_00343 Microbotryum violaceum MVLG_00343 N
MVLG_04557 Microbotryum violaceum MVLG_04557 N
NV11921 Nasonia vitripennis NV11921 I
PaG_02426 Pseudozyma aphidis PaG_02426 N
PaG_05617 Pseudozyma aphidis PaG_05617 N
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I
PHLGIDRAFT_121875 Phlebiopsis gigantea PHLGIDRAFT_121875 N
PHSY_004115 Pseudozyma hubeiensis PHSY_004115 I
PHUM471030 Pediculus humanus PHUM471030 I
PILCRDRAFT_533337 Piloderma croceum PILCRDRAFT_533337 I
PISMIDRAFT_39129 Pisolithus microcarpus PISMIDRAFT_39129 I
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I
RHTO_08065 Rhodosporidium toruloides RHTO_08065 N
RTG_02343 Rhodotorula glutinis RTG_02343 N
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I
SERLA73DRAFT_71121 Serpula lacrymans SERLA73DRAFT_71121 I
SINV24164 Solenopsis invicta SINV24164 I
UHOR_02166 Ustilago hordei UHOR_02166 I
UV8b_6489 Ustilaginoidea virens UV8b_6489 I
X797_005729 Metarhizium robertsii X797_005729 I