ORUFI01G35100 (Oryza rufipogon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ORUFI01G35100 T344201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.939 0.508
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.938 0.483
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.930 0.492
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.903 0.508
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.903 0.508
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.896 0.415
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.890 0.449
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.890 0.449
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.875 0.390
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.875 0.390
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.875 0.390
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.865 0.390
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.865 0.390
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.865 0.407
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.865 0.390
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.851 0.364
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI01G35100.1 TCP 54 171

Links

Other TCP family TFs
Other Oryza rufipogon TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008070 Calypte anna Aan_R008070 I
ENSAMEG00000019654 Ailuropoda melanoleuca ENSAMEG00000019654 I
ENSBTAP00000004465-D1 Bos grunniens ENSBTAP00000004465-D1 I
ENSCSAG00000019711 Chlorocebus sabaeus ENSCSAG00000019711 I
ENSDORG00000001810 Dipodomys ordii ENSDORG00000001810 I
ENSMPUG00000019227 Mustela putorius furo ENSMPUG00000019227 I
ENSNLEG00000017415 Nomascus leucogenys ENSNLEG00000017415 I
ENSOARG00000012600 Ovis aries ENSOARG00000012600 I
ENSP00000362556 Macaca fascicularis ENSP00000362556 I
ENSPANG00000000295 Papio anubis ENSPANG00000000295 I
ENSPPYG00000019615 Pongo abelii ENSPPYG00000019615 I
ENSSSCG00000029288 Sus scrofa ENSSSCG00000029288 I
ENSSTOG00000007435 Ictidomys tridecemlineatus ENSSTOG00000007435 I
ZBTB43 Ochotona princeps ENSOPRG00000011453 I
ZBTB43 Bos taurus ENSBTAG00000003438 I
ZBTB43 Callithrix jacchus ENSCJAG00000017939 I
ZBTB43 Dasypus novemcinctus ENSDNOG00000032194 I
ZBTB43 Sorex araneus ENSSARG00000013849 I
Zbtb43 Rattus norvegicus ENSRNOG00000017017 I
ZBTB43 Pteropus vampyrus ENSPVAG00000017706 I
ZBTB43 Pan troglodytes ENSPTRG00000021378 I
ZBTB43 Procavia capensis ENSPCAG00000006897 I
ZBTB43 Felis catus ENSFCAG00000031874 I
ZBTB43 Otolemur garnettii ENSOGAG00000002029 I
ZBTB43 Oryctolagus cuniculus ENSOCUG00000009799 I
ZBTB43 Equus caballus ENSECAG00000013239 I
ZBTB43 Erinaceus europaeus ENSEEUG00000009258 I
Zbtb43 Mus musculus ENSMUSG00000026788 I
ZBTB43 Echinops telfairi ENSETEG00000000019 I
ZBTB43 Macaca mulatta ENSMMUG00000013640 I
ZBTB43 Myotis lucifugus ENSMLUG00000010893 I
ZBTB43 Loxodonta africana ENSLAFG00000011314 I
ZBTB43 Gorilla gorilla ENSGGOG00000017180 I
ZBTB43 Homo sapiens ENSG00000169155 D