PGSC0003DMG400022964 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400022964 T344267_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.919 0.426
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.905 0.426
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.905 0.426
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.905 0.426
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.905 0.411
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.905 0.411
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.878 0.349
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.878 0.349
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.875 0.357
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.875 0.357
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.865 0.372
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.855 0.349
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.848 0.357
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.839 0.357
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.839 0.357
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.828 0.326
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400059117 TCP 91 219

Links

Other TCP family TFs
Other Solanum tuberosum TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008512 Ailuropoda melanoleuca ENSAMEG00000008512 I
ENSBTAP00000022184-D1 Bos grunniens ENSBTAP00000022184-D1 I
ENSCSAG00000002403 Chlorocebus sabaeus ENSCSAG00000002403 I
ENSMPUG00000005930 Mustela putorius furo ENSMPUG00000005930 I
ENSOARG00000000770 Ovis aries ENSOARG00000000770 I
ENSP00000337724 Macaca fascicularis ENSP00000337724 I
ENSPANG00000004921 Papio anubis ENSPANG00000004921 I
ENSPPYG00000003989 Pongo abelii ENSPPYG00000003989 I
ENSSHAG00000009268 Sarcophilus harrisii ENSSHAG00000009268 I
ENSSTOG00000027536 Ictidomys tridecemlineatus ENSSTOG00000027536 I
ENSTSYG00000010154 Tarsius syrichta ENSTSYG00000010154 I
ZNF202 Bos taurus ENSBTAG00000016684 I
ZNF202 Equus caballus ENSECAG00000024393 I
ZNF202 Choloepus hoffmanni ENSCHOG00000007537 I
ZNF202 Vicugna pacos ENSVPAG00000004840 I
ZNF202 Tursiops truncatus ENSTTRG00000011530 I
ZNF202 Tupaia belangeri ENSTBEG00000011372 I
ZNF202 Sus scrofa ENSSSCG00000015145 I
ZNF202 Pan troglodytes ENSPTRG00000004409 I
ZNF202 Otolemur garnettii ENSOGAG00000026373 I
ZNF202 Oryctolagus cuniculus ENSOCUG00000014264 I
ZNF202 Callithrix jacchus ENSCJAG00000007782 I
ZNF202 Dasypus novemcinctus ENSDNOG00000031856 I
ZNF202 Monodelphis domestica ENSMODG00000012927 I
ZNF202 Macaca mulatta ENSMMUG00000010646 I
ZNF202 Microcebus murinus ENSMICG00000007659 I
ZNF202 Loxodonta africana ENSLAFG00000008599 I
ZNF202 Gorilla gorilla ENSGGOG00000006891 I
ZNF202 Homo sapiens ENSG00000166261 D