CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF002700090CFD_g
(
Triticum aestivum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
TRAES3BF002700090CFD_g
T344461_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC
GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.948
0.670
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.938
0.636
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.935
0.636
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.924
0.568
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC
GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.897
0.534
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.897
0.523
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.892
0.580
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.892
0.580
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.885
0.557
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.885
0.557
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.878
0.500
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.878
0.500
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.878
0.500
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.877
0.489
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.873
0.489
OS01G0213800
M11398_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.845
0.489
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF002700090CFD_t1
TCP
52
143
FGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPHQVDLMDHMMTSSSMPLMPHVDDK
Links
Other
TCP
family TFs
Other
Triticum aestivum
TFs
424 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_01837
Exophiala aquamarina
A1O9_01837
I
0.000
A1O9_03872
Exophiala aquamarina
A1O9_03872
N
0.000
AB10636.1
Alternaria brassicicola
AB10636.1
N
0.000
ACLA_070410
Aspergillus clavatus
CADACLAG00006808
N
0.000
AFUA_2G11460
Aspergillus fumigatus
CADAFUAG00004521
I
0.000
AFUA_5G11070
Aspergillus fumigatus
CADAFUAG00005917
I
0.000
AOL_s00076g272
Arthrobotrys oligospora
AOL_s00076g272
N
0.000
ARB_01321
Arthroderma benhamiae
ARB_01321
I
0.000
ATEG_07690
Aspergillus terreus
CADATEAG00003243
I
0.000
AUEXF2481DRAFT_456199
Aureobasidium subglaciale
AUEXF2481DRAFT_456199
I
0.000
BAUCODRAFT_124270
Baudoinia compniacensis
BAUCODRAFT_124270
I
0.000
BBA_01514
Beauveria bassiana
BBA_01514
I
0.000
Bcin07g01630
Botrytis cinerea
Bcin07g01630
N
0.000
BDDG_09744
Blastomyces dermatitidis
BDDG_09744
I
0.000
CADAFLAG00007096
Aspergillus flavus
CADAFLAG00007096
I
0.000
CADAORAG00008740
Aspergillus oryzae
CADAORAG00008740
I
0.000
CCM_04341
Cordyceps militaris
CCM_04341
I
0.000
CIMG_04661
Coccidioides immitis
CIMG_04661
I
0.000
CIMG_08192
Coccidioides immitis
CIMG_08192
I
0.000
COCC4DRAFT_19355
Bipolaris maydis
COCC4DRAFT_19355
I
0.000
COCC4DRAFT_63629
Bipolaris maydis
COCC4DRAFT_63629
N
0.000
COCCADRAFT_32122
Bipolaris zeicola
COCCADRAFT_32122
I
0.000
COCCADRAFT_34097
Bipolaris zeicola
COCCADRAFT_34097
N
0.000
COCMIDRAFT_101691
Bipolaris oryzae
COCMIDRAFT_101691
N
0.000
COCMIDRAFT_24418
Bipolaris oryzae
COCMIDRAFT_24418
I
0.000
COCSADRAFT_170559
Bipolaris sorokiniana
COCSADRAFT_170559
N
0.000
COCSADRAFT_306311
Bipolaris sorokiniana
COCSADRAFT_306311
I
0.000
COCVIDRAFT_108667
Bipolaris victoriae
COCVIDRAFT_108667
N
0.000
COCVIDRAFT_12188
Bipolaris victoriae
COCVIDRAFT_12188
I
0.000
CPC735_022090
Coccidioides posadasii
CPC735_022090
I
0.000
DOTSEDRAFT_88360
Dothistroma septosporum
DOTSEDRAFT_88360
N
0.000
estExt_fgenesh1_pg.C_40169
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_40169
I
0.000
estExt_fgenesh1_pm.C_chr_50216
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50216
N
0.000
EURHEDRAFT_417798
Aspergillus ruber
EURHEDRAFT_417798
I
0.000
EURHEDRAFT_528519
Aspergillus ruber
EURHEDRAFT_528519
I
0.000
fgenesh1_pm.00866_#_274
Aspergillus carbonarius
fgenesh1_pm.00866_#_274
I
0.000
GMDG_07447
Pseudogymnoascus destructans
GMDG_07447
N
0.000
gw1.59.15.1
Mycosphaerella fijiensis
gw1.59.15.1
N
0.000
H072_1134
Dactylellina haptotyla
H072_1134
N
0.000
H101_03862
Trichophyton interdigitale
H101_03862
I
0.000
H101_07358
Trichophyton interdigitale
H101_07358
I
0.000
H102_03415
Trichophyton rubrum
H102_03415
I
0.000
H105_03436
Trichophyton soudanense
H105_03436
I
0.000
HCBG_04284
Histoplasma capsulatum
HCBG_04284
N
0.000
LEMA_P057360.1
Leptosphaeria maculans
LEMA_P057360.1
N
0.000
LEMA_P120870.1
Leptosphaeria maculans
LEMA_P120870.1
I
0.000
M438DRAFT_344531
Aureobasidium pullulans
M438DRAFT_344531
I
0.000
MBM_01678
Marssonina brunnea
MBM_01678
I
0.000
MCYG_02230
Microsporum canis
MCYG_02230
I
0.000
MCYG_02230
Arthroderma otae
MCYG_02230
I
0.000
MCYG_05833
Microsporum canis
MCYG_05833
I
0.000
MCYG_05833
Arthroderma otae
MCYG_05833
I
0.000
MGYG_02927
Microsporum gypseum
MGYG_02927
I
0.000
MGYG_06143
Microsporum gypseum
MGYG_06143
I
0.000
MPH_05611
Macrophomina phaseolina
MPH_05611
N
0.000
MYCFIDRAFT_216484
Pseudocercospora fijiensis
MYCFIDRAFT_216484
N
0.000
Mycgr3G100243
Zymoseptoria tritici
Mycgr3G100243
N
0.000
Mycgr3G66114
Zymoseptoria tritici
Mycgr3G66114
N
0.000
NFIA_076190
Neosartorya fischeri
CADNFIAG00007846
I
0.000
NFIA_086700
Neosartorya fischeri
CADNFIAG00008233
I
0.000
OIDMADRAFT_152619
Oidiodendron maius
OIDMADRAFT_152619
N
0.000
PAAG_03678
Paracoccidioides sp lutzii
PAAG_03678
I
0.000
PABG_00737
Paracoccidioides brasiliensis
PABG_00737
I
0.000
Pc15g00340
Penicillium chrysogenum
Pc15g00340
N
0.000
Pc21g05540
Penicillium chrysogenum
Pc21g05540
I
0.000
PCH_Pc15g00340
Penicillium rubens
PCH_Pc15g00340
N
0.000
PCH_Pc21g05540
Penicillium rubens
PCH_Pc21g05540
I
0.000
PDE_09179
Penicillium oxalicum
PDE_09179
I
0.000
PDIP_10950
Penicillium digitatum
PDIP_10950
N
0.000
PEX1_002010
Penicillium expansum
PEX1_002010
N
0.000
PEX1_066340
Penicillium expansum
PEX1_066340
I
0.000
PEX1_087000
Penicillium expansum
PEX1_087000
I
0.000
PFICI_05184
Pestalotiopsis fici
PFICI_05184
I
0.000
PITC_033600
Penicillium italicum
PITC_033600
I
0.000
PITC_054700
Penicillium italicum
PITC_054700
I
0.000
PITC_071780
Penicillium italicum
PITC_071780
N
0.000
PMAA_033170
Talaromyces marneffei
PMAA_033170
I
0.000
PMAA_033170
Penicillium marneffei
PMAA_033170
I
0.000
PMAA_048690
Talaromyces marneffei
PMAA_048690
N
0.000
PMAA_048690
Penicillium marneffei
PMAA_048690
N
0.000
PTRG_07169
Pyrenophora triticirepentis
PTRG_07169
I
0.000
PTRG_11285
Pyrenophora triticirepentis
PTRG_11285
N
0.000
PTT_11312
Pyrenophora teres
PTT_11312
N
0.000
PTT_16310
Pyrenophora teres
PTT_16310
I
0.000
PV05_03582
Exophiala xenobiotica
PV05_03582
I
0.000
PV05_05867
Exophiala xenobiotica
PV05_05867
N
0.000
PV06_07091
Exophiala oligosperma
PV06_07091
N
0.000
PV06_08141
Exophiala oligosperma
PV06_08141
I
0.000
PV08_06966
Exophiala spinifera
PV08_06966
I
0.000
PV10_06359
Exophiala mesophila
PV10_06359
I
0.000
PV11_00424
Exophiala sideris
PV11_00424
N
0.000
PVAR5_2500
Byssochlamys spectabilis
PVAR5_2500
I
0.000
SEPMUDRAFT_150864
Sphaerulina musiva
SEPMUDRAFT_150864
N
0.000
SETTUDRAFT_172422
Setosphaeria turcica
SETTUDRAFT_172422
N
0.000
SNOG_00909
Stagonospora nodorum
SNOG_00909
I
0.000
SNOG_13663
Stagonospora nodorum
SNOG_13663
N
0.000
SNOG_13663
Phaeosphaeria nodorum
SNOG_13663
N
0.000
SS1G_01353
Sclerotinia sclerotiorum
SS1G_01353
N
0.000
TEQG_05320
Trichophyton equinum
TEQG_05320
I
0.000
TEQG_06790
Trichophyton equinum
TEQG_06790
I
0.000
TESG_06426
Trichophyton tonsurans
TESG_06426
I
0.000
TESG_06981
Trichophyton tonsurans
TESG_06981
I
0.000
TRV_07383
Trichophyton verrucosum
TRV_07383
I
0.000
TSTA_020390
Talaromyces stipitatus
TSTA_020390
I
0.000
TSTA_038740
Talaromyces stipitatus
TSTA_038740
I
0.000
TSTA_064390
Talaromyces stipitatus
TSTA_064390
I
0.000
U727_0043114071
Penicillium solitum
U727_0043114071
I
0.000
U727_00433201101
Penicillium solitum
U727_00433201101
N
0.000
U727_00434270371
Penicillium solitum
U727_00434270371
I
0.000
UCRNP2_3613
Neofusicoccum parvum
UCRNP2_3613
N
0.000
W97_02535
Coniosporium apollinis
W97_02535
I
0.000
W97_05295
Coniosporium apollinis
W97_05295
N
0.000
YALI0_D23045g
Yarrowia lipolytica
YALI0_D23045g
I
0.000