VIT_19s0014g01680 (Vitis vinifera)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 VIT_19s0014g01680 T344504_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.959 0.622
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.959 0.622
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.956 0.555
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.956 0.555
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.956 0.555
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.940 0.521
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.898 0.437
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.895 0.429
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.887 0.412
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.876 0.387
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.856 0.378
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.848 0.345
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.845 0.387
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.845 0.387
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_19s0014g01680.t01 TCP 38 250

Links

Other TCP family TFs
Other Vitis vinifera TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00587.1 Alternaria brassicicola AB00587.1 I
BAUCODRAFT_79055 Baudoinia compniacensis BAUCODRAFT_79055 I
Bcin12g03530 Botrytis cinerea Bcin12g03530 I
CaO19.1227 Candida albicans CaO19.1227 I
CaO19.8813 Candida albicans CaO19.8813 I
CD36_07140 Candida dubliniensis CD36_07140 I
CHGG_04995 Chaetomium globosum CHGG_04995 I
Cob_02318 Colletotrichum orbiculare Cob_02318 I
COCC4DRAFT_156489 Bipolaris maydis COCC4DRAFT_156489 I
COCMIDRAFT_81410 Bipolaris oryzae COCMIDRAFT_81410 I
COCSADRAFT_166493 Bipolaris sorokiniana COCSADRAFT_166493 I
COCVIDRAFT_12975 Bipolaris victoriae COCVIDRAFT_12975 I
EPUS_00566 Endocarpon pusillum EPUS_00566 I
estExt_fgenesh1_pg.C_20387 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20387 I
estExt_fgenesh2_pg.C_30094 Neurospora discreta estExt_fgenesh2_pg.C_30094 I
e_gw1.20.1180.1 Nectria haematococca e_gw1.20.1180.1 I
F503_05814 Ophiostoma piceae uamh F503_05814 I
FFUJ_09638 Fusarium fujikuroi FFUJ_09638 I
FGRRES_16137 Fusarium graminearum FGRRES_16137 I
FOXG_11440 Fusarium oxysporum FOXG_11440 I
FPSE_10395 Fusarium pseudograminearum FPSE_10395 I
FVEG_10380 Fusarium verticillioides FVEG_10380 I
GGTG_03357 Gaeumannomyces graminis GGTG_03357 I
GLRG_05692 Colletotrichum graminicola GLRG_05692 I
gw1.10.415.1 Mycosphaerella fijiensis gw1.10.415.1 I
LEMA_P036570.1 Leptosphaeria maculans LEMA_P036570.1 I
MAPG_01428 Magnaporthe poae MAPG_01428 I
MGG_01887 Magnaporthe oryzae MGG_01887 I
MYCFIDRAFT_107799 Pseudocercospora fijiensis MYCFIDRAFT_107799 I
NCU08658 Neurospora crassa NCU08658 D
NechaG43849 Fusarium solani NechaG43849 I
NEUTE1DRAFT_39574 Neurospora tetrasperma NEUTE1DRAFT_39574 I
PTRG_08944 Pyrenophora triticirepentis PTRG_08944 I
PTT_17743 Pyrenophora teres PTT_17743 I
PV07_00139 Cladophialophora immunda PV07_00139 I
PV07_00458 Cladophialophora immunda PV07_00458 I
SBOR_8674 Sclerotinia borealis SBOR_8674 I
SNOG_08674 Phaeosphaeria nodorum SNOG_08674 N
SNOG_08674 Stagonospora nodorum SNOG_08674 N
THITE_11494 Thielavia terrestris THITE_11494 I
VDAG_10186 Verticillium dahliae VDAG_10186 I
Z517_01546 Fonsecaea pedrosoi Z517_01546 I
Z517_01830 Fonsecaea pedrosoi Z517_01830 I