CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm029788
(
Prunus mume
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Pm029788
T344568_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.958
0.493
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.956
0.486
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.952
0.436
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.952
0.436
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.952
0.436
OS01G0213800
M11398_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.938
0.436
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.898
0.357
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.885
0.357
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC
GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.884
0.350
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC
GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.861
0.321
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.853
0.336
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.853
0.336
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.843
0.307
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.842
0.321
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm029788
TCP
26
179
TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHPITGVAANNAEPDQSNPNEMVIAGGAEETESSGYNFHQLQRQMGENNNNQANNVSSFNIPPSLDSDTIADTMKSFFPTSSAANSSI
Links
Other
TCP
family TFs
Other
Prunus mume
TFs
422 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03703
Capronia coronata
A1O1_03703
N
A1O5_08031
Cladophialophora psammophila
A1O5_08031
N
A1O9_03872
Exophiala aquamarina
A1O9_03872
N
AB10636.1
Alternaria brassicicola
AB10636.1
N
ACLA_070410
Aspergillus clavatus
CADACLAG00006808
N
ACRE_013750
Acremonium chrysogenum
ACRE_013750
I
AFUA_2G11460
Aspergillus fumigatus
CADAFUAG00004521
I
ANIA_05870
Aspergillus nidulans
CADANIAG00007168
I
AOL_s00076g272
Arthrobotrys oligospora
AOL_s00076g272
N
ARB_01321
Arthroderma benhamiae
ARB_01321
I
AUEXF2481DRAFT_24415
Aureobasidium subglaciale
AUEXF2481DRAFT_24415
I
BAUCODRAFT_243073
Baudoinia compniacensis
BAUCODRAFT_243073
N
BAUCODRAFT_79055
Baudoinia compniacensis
BAUCODRAFT_79055
I
BBA_01514
Beauveria bassiana
BBA_01514
I
Bcin07g01630
Botrytis cinerea
Bcin07g01630
N
BDDG_09744
Blastomyces dermatitidis
BDDG_09744
I
BN946_scf184775.g19
Trametes cinnabarina
BN946_scf184775.g19
N
CADANGAG00001855
Aspergillus niger
CADANGAG00001855
N
CADAORAG00008529
Aspergillus oryzae
CADAORAG00008529
N
CCM_04341
Cordyceps militaris
CCM_04341
I
CERSUDRAFT_114532
Ceriporiopsis subvermispora
CERSUDRAFT_114532
I
CFIO01_12268
Colletotrichum fioriniae
CFIO01_12268
I
CGGC5_2102
Colletotrichum gloeosporioides
CGGC5_2102
I
CH063_01368
Colletotrichum higginsianum
CH063_01368
N
CHGG_04995
Chaetomium globosum
CHGG_04995
I
CIMG_08192
Coccidioides immitis
CIMG_08192
I
COCC4DRAFT_63629
Bipolaris maydis
COCC4DRAFT_63629
N
COCCADRAFT_34097
Bipolaris zeicola
COCCADRAFT_34097
N
COCMIDRAFT_101691
Bipolaris oryzae
COCMIDRAFT_101691
N
COCSADRAFT_170559
Bipolaris sorokiniana
COCSADRAFT_170559
N
COCVIDRAFT_108667
Bipolaris victoriae
COCVIDRAFT_108667
N
CPC735_022090
Coccidioides posadasii
CPC735_022090
I
CSUB01_08743
Colletotrichum sublineola
CSUB01_08743
I
DOTSEDRAFT_88360
Dothistroma septosporum
DOTSEDRAFT_88360
N
estExt_fgenesh1_pm.C_chr_50216
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50216
N
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326
Nectria haematococca
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326
I
estExt_fgenesh2_pg.C_30094
Neurospora discreta
estExt_fgenesh2_pg.C_30094
I
estExt_Genewise1Plus.C_chr_11826
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_11826
N
EURHEDRAFT_513477
Aspergillus ruber
EURHEDRAFT_513477
N
e_gw1.3.1267.1
Cryphonectria parasitica
e_gw1.3.1267.1
I
F503_05786
Ophiostoma piceae uamh
F503_05786
I
FFUJ_04988
Fusarium fujikuroi
FFUJ_04988
I
fgenesh1_pm.00866_#_274
Aspergillus carbonarius
fgenesh1_pm.00866_#_274
I
FGRRES_06160
Fusarium graminearum
FGRRES_06160
I
FIBRA_03539
Fibroporia radiculosa
FIBRA_03539
I
FOMPIDRAFT_1024907
Fomitopsis pinicola
FOMPIDRAFT_1024907
I
FOXG_08550
Fusarium oxysporum
FOXG_08550
I
FPSE_02512
Fusarium pseudograminearum
FPSE_02512
I
G647_09620
Cladophialophora carrionii
G647_09620
N
GLRG_02776
Colletotrichum graminicola
GLRG_02776
I
GMDG_07447
Pseudogymnoascus destructans
GMDG_07447
N
gw1.59.15.1
Mycosphaerella fijiensis
gw1.59.15.1
N
H072_1134
Dactylellina haptotyla
H072_1134
N
H101_03862
Trichophyton interdigitale
H101_03862
I
H101_07358
Trichophyton interdigitale
H101_07358
I
H102_03415
Trichophyton rubrum
H102_03415
I
H105_03436
Trichophyton soudanense
H105_03436
I
HCBG_04284
Histoplasma capsulatum
HCBG_04284
N
HMPREF1120_08148
Exophiala dermatitidis
HMPREF1120_08148
I
HMPREF1541_00939
Cyphellophora europaea
HMPREF1541_00939
N
JAAARDRAFT_136956
Jaapia argillacea
JAAARDRAFT_136956
I
LEMA_P057360.1
Leptosphaeria maculans
LEMA_P057360.1
N
M378DRAFT_197822
Amanita muscaria
M378DRAFT_197822
I
M413DRAFT_441943
Hebeloma cylindrosporum
M413DRAFT_441943
I
M437DRAFT_14692
Aureobasidium melanogenum
M437DRAFT_14692
I
M438DRAFT_323991
Aureobasidium pullulans
M438DRAFT_323991
I
MAC_00726
Metarhizium acridum
MAC_00726
N
MAJ_01716
Metarhizium majus
MAJ_01716
N
MAM_03911
Metarhizium album
MAM_03911
N
MANI_020691
Metarhizium anisopliae
MANI_020691
N
MBM_01678
Marssonina brunnea
MBM_01678
I
MBR_00349
Metarhizium brunneum
MBR_00349
N
MCYG_02230
Microsporum canis
MCYG_02230
I
MCYG_02230
Arthroderma otae
MCYG_02230
I
MCYG_05833
Microsporum canis
MCYG_05833
I
MCYG_05833
Arthroderma otae
MCYG_05833
I
MGG_05153
Magnaporthe oryzae
MGG_05153
I
MGG_07131
Magnaporthe oryzae
MGG_07131
I
MGU_01192
Metarhizium guizhouense
MGU_01192
N
MGYG_02927
Microsporum gypseum
MGYG_02927
I
MGYG_06143
Microsporum gypseum
MGYG_06143
I
MPH_05611
Macrophomina phaseolina
MPH_05611
N
MYCFIDRAFT_216484
Pseudocercospora fijiensis
MYCFIDRAFT_216484
N
Mycgr3G100243
Zymoseptoria tritici
Mycgr3G100243
N
Mycgr3G66114
Zymoseptoria tritici
Mycgr3G66114
N
NCU08658
Neurospora crassa
NCU08658
D
NechaG103398
Fusarium solani
NechaG103398
I
NEUTE1DRAFT_39574
Neurospora tetrasperma
NEUTE1DRAFT_39574
I
NFIA_086700
Neosartorya fischeri
CADNFIAG00008233
I
OCS_01600
Ophiocordyceps sinensis
OCS_01600
I
OIDMADRAFT_152619
Oidiodendron maius
OIDMADRAFT_152619
N
PAAG_03678
Paracoccidioides sp lutzii
PAAG_03678
I
PABG_00737
Paracoccidioides brasiliensis
PABG_00737
I
Pc15g00340
Penicillium chrysogenum
Pc15g00340
N
PCH_Pc15g00340
Penicillium rubens
PCH_Pc15g00340
N
PDE_08558
Penicillium oxalicum
PDE_08558
I
PDIP_10950
Penicillium digitatum
PDIP_10950
N
PEX1_002010
Penicillium expansum
PEX1_002010
N
PFICI_05184
Pestalotiopsis fici
PFICI_05184
I
PITC_071780
Penicillium italicum
PITC_071780
N
PMAA_041870
Talaromyces marneffei
PMAA_041870
I
PMAA_041870
Penicillium marneffei
PMAA_041870
I
PMAA_048690
Talaromyces marneffei
PMAA_048690
N
PMAA_048690
Penicillium marneffei
PMAA_048690
N
PTRG_11285
Pyrenophora triticirepentis
PTRG_11285
N
PTT_11312
Pyrenophora teres
PTT_11312
N
PV05_05867
Exophiala xenobiotica
PV05_05867
N
PV06_07091
Exophiala oligosperma
PV06_07091
N
PV08_00631
Exophiala spinifera
PV08_00631
N
PV09_03082
Verruconis gallopava
PV09_03082
N
PV11_00424
Exophiala sideris
PV11_00424
N
PVAR5_3215
Byssochlamys spectabilis
PVAR5_3215
I
S40285_00977
Stachybotrys chlorohalonata
S40285_00977
I
S40288_06232
Stachybotrys chartarum
S40288_06232
I
SEPMUDRAFT_150864
Sphaerulina musiva
SEPMUDRAFT_150864
N
SETTUDRAFT_172422
Setosphaeria turcica
SETTUDRAFT_172422
N
SNOG_13663
Stagonospora nodorum
SNOG_13663
N
SNOG_13663
Phaeosphaeria nodorum
SNOG_13663
N
SS1G_01353
Sclerotinia sclerotiorum
SS1G_01353
N
TEQG_05320
Trichophyton equinum
TEQG_05320
I
TEQG_06790
Trichophyton equinum
TEQG_06790
I
TESG_06426
Trichophyton tonsurans
TESG_06426
I
TESG_06981
Trichophyton tonsurans
TESG_06981
I
THITE_11494
Thielavia terrestris
THITE_11494
I
THITE_2115656
Thielavia terrestris
THITE_2115656
I
TRIATDRAFT_34316
Trichoderma atroviride
TRIATDRAFT_34316
I
TRIREDRAFT_55274
Trichoderma reesei
TRIREDRAFT_55274
I
TRIVIDRAFT_28488
Trichoderma virens
TRIVIDRAFT_28488
N
TRV_07383
Trichophyton verrucosum
TRV_07383
I
TSTA_038740
Talaromyces stipitatus
TSTA_038740
I
TSTA_076120
Talaromyces stipitatus
TSTA_076120
I
U727_00433201101
Penicillium solitum
U727_00433201101
N
UCRNP2_3613
Neofusicoccum parvum
UCRNP2_3613
N
V565_106980
Rhizoctonia solani
V565_106980
N
VDAG_08992
Verticillium dahliae
VDAG_08992
I
VHEMI03513
Torrubiella hemipterigena
VHEMI03513
I
W97_05295
Coniosporium apollinis
W97_05295
N
X797_005336
Metarhizium robertsii
X797_005336
N
Z517_04030
Fonsecaea pedrosoi
Z517_04030
N
Z518_08584
Rhinocladiella mackenziei
Z518_08584
N
Z519_07868
Cladophialophora bantiana
Z519_07868
N