29693.m001968 (Ricinus communis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 29693.m001968 T344575_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.947 0.619
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.939 0.568
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.938 0.561
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.894 0.368
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.890 0.323
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.889 0.316
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.889 0.316
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.886 0.316
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.883 0.297
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.883 0.297
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.883 0.297
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.883 0.316
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.881 0.348
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.877 0.303
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.864 0.297
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.864 0.297
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29693.m001968 TCP 89 246

Links

Other TCP family TFs
Other Ricinus communis TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000032300-D1 Bos grunniens ENSBTAP00000032300-D1 N
ENSCSAG00000004627 Chlorocebus sabaeus ENSCSAG00000004627 N
ENSDNOG00000032686 Dasypus novemcinctus ENSDNOG00000032686 N
ENSNLEG00000004017 Nomascus leucogenys ENSNLEG00000004017 N
ENSOARG00000002232 Ovis aries ENSOARG00000002232 N
ENSP00000398602 Macaca fascicularis ENSP00000398602 N
ENSPANG00000019280 Papio anubis ENSPANG00000019280 N
ENSSTOG00000007763 Ictidomys tridecemlineatus ENSSTOG00000007763 N
TERB1 Loxodonta africana ENSLAFG00000009064 N
Terb1 Rattus norvegicus ENSRNOG00000055097 N
TERB1 Pan troglodytes ENSPTRG00000008201 N
Terb1 Mus musculus ENSMUSG00000052616 N
TERB1 Bos taurus ENSBTAG00000016438 N
TERB1 Gorilla gorilla ENSGGOG00000003333 N
TERB1 Homo sapiens ENSG00000249961 N
TERB1 Felis catus ENSFCAG00000027927 N
TERB1 Cavia porcellus ENSCPOG00000015414 N
TERB1 Callithrix jacchus ENSCJAG00000016748 N
TERB1 Canis familiaris ENSCAFG00000020407 N