CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.1659s0005
(
Capsella grandiflora
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Cagra.1659s0005
T344733_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1659s0005.1.p
TCP
58
147
HRHLHHHHRPTFPFQLLGKRDPDDNHQQQPSPSSSSTLFSLHQHQQLSQSQQQQPQPQKPQPQTTQKELLQQPQEESTAVVAAKKPPLKR
Cagra.1659s0005.1.p
TCP
148
339
ASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSPAMLQQQQQQRGGGGGGFHHHPHLQGRATTSSLFPGIDNFTPTTSFLNFHNPTKQEGDQDSDELSSEKKRRLQTTSDLQLQHQHDQIGSYT
Links
Other
TCP
family TFs
Other
Capsella grandiflora
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PFL1_04761
Pseudozyma flocculosa
PFL1_04761
N
PHSY_002566
Pseudozyma hubeiensis
PHSY_002566
N
PSEUBRA_SCAF23g05206
Pseudozyma brasiliensis
PSEUBRA_SCAF23g05206
N
sr16858
Sporisorium reilianum
sr16858
N
UM06415
Ustilago maydis
UM06415
N