CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene29800-v1.0-hybrid
(
Fragaria vesca
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
gene29800-v1.0-hybrid
T344845_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna29800.1-v1.0-hybrid
TCP
71
201
STKKDRHTKVLTTKGPRDRRFRLAAQTAIEFYDVQDRLGYARPSMAIDWLIQKAKASIEALGNSSTVQQPQQHQGGPAVPETVEIHQHFNESAMNNVSKEPVLGFAEEVLNYATNLSEADFMEMAISQSLM
Links
Other
TCP
family TFs
Other
Fragaria vesca
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03703
Capronia coronata
A1O1_03703
N
0.000
A1O5_08031
Cladophialophora psammophila
A1O5_08031
N
0.000
A1O5_08185
Cladophialophora psammophila
A1O5_08185
N
0.000
A1O9_03872
Exophiala aquamarina
A1O9_03872
N
0.000
AB10636.1
Alternaria brassicicola
AB10636.1
N
0.000
ACLA_070410
Aspergillus clavatus
CADACLAG00006808
N
0.000
AFUA_2G11460
Aspergillus fumigatus
CADAFUAG00004521
I
0.000
ANIA_05870
Aspergillus nidulans
CADANIAG00007168
I
0.000
AOL_s00076g272
Arthrobotrys oligospora
AOL_s00076g272
N
0.000
ARB_01321
Arthroderma benhamiae
ARB_01321
I
0.000
AUEXF2481DRAFT_24415
Aureobasidium subglaciale
AUEXF2481DRAFT_24415
I
0.000
Bcin07g01630
Botrytis cinerea
Bcin07g01630
N
0.000
BDDG_05568
Blastomyces dermatitidis
BDDG_05568
N
0.000
BDDG_09744
Blastomyces dermatitidis
BDDG_09744
I
0.000
CADANGAG00001855
Aspergillus niger
CADANGAG00001855
N
0.000
CADAORAG00008529
Aspergillus oryzae
CADAORAG00008529
N
0.000
CIMG_08192
Coccidioides immitis
CIMG_08192
I
0.000
COCC4DRAFT_63629
Bipolaris maydis
COCC4DRAFT_63629
N
0.000
COCCADRAFT_34097
Bipolaris zeicola
COCCADRAFT_34097
N
0.000
COCMIDRAFT_101691
Bipolaris oryzae
COCMIDRAFT_101691
N
0.000
COCSADRAFT_170559
Bipolaris sorokiniana
COCSADRAFT_170559
N
0.000
COCVIDRAFT_108667
Bipolaris victoriae
COCVIDRAFT_108667
N
0.000
CPC735_022090
Coccidioides posadasii
CPC735_022090
I
0.000
DOTSEDRAFT_88360
Dothistroma septosporum
DOTSEDRAFT_88360
N
0.000
estExt_fgenesh1_pm.C_chr_50216
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50216
N
0.000
EURHEDRAFT_513477
Aspergillus ruber
EURHEDRAFT_513477
N
0.000
fgenesh1_pm.00866_#_274
Aspergillus carbonarius
fgenesh1_pm.00866_#_274
I
0.000
GMDG_07447
Pseudogymnoascus destructans
GMDG_07447
N
0.000
gw1.59.15.1
Mycosphaerella fijiensis
gw1.59.15.1
N
0.000
H072_1134
Dactylellina haptotyla
H072_1134
N
0.000
H101_07358
Trichophyton interdigitale
H101_07358
I
0.000
H102_03415
Trichophyton rubrum
H102_03415
I
0.000
H105_03436
Trichophyton soudanense
H105_03436
I
0.000
HCBG_03369
Histoplasma capsulatum
HCBG_03369
N
0.000
HCBG_04284
Histoplasma capsulatum
HCBG_04284
N
0.000
HMPREF1541_00939
Cyphellophora europaea
HMPREF1541_00939
N
0.000
LEMA_P057360.1
Leptosphaeria maculans
LEMA_P057360.1
N
0.000
M437DRAFT_14692
Aureobasidium melanogenum
M437DRAFT_14692
I
0.000
M438DRAFT_323991
Aureobasidium pullulans
M438DRAFT_323991
I
0.000
MAC_00726
Metarhizium acridum
MAC_00726
N
0.000
MAJ_01716
Metarhizium majus
MAJ_01716
N
0.000
MAM_03911
Metarhizium album
MAM_03911
N
0.000
MANI_020691
Metarhizium anisopliae
MANI_020691
N
0.000
MBM_01678
Marssonina brunnea
MBM_01678
I
0.000
MBR_00349
Metarhizium brunneum
MBR_00349
N
0.000
MCYG_02230
Arthroderma otae
MCYG_02230
I
0.000
MCYG_02230
Microsporum canis
MCYG_02230
I
0.000
MGU_01192
Metarhizium guizhouense
MGU_01192
N
0.000
MGYG_02927
Microsporum gypseum
MGYG_02927
I
0.000
MPH_01921
Macrophomina phaseolina
MPH_01921
I
0.000
MPH_05611
Macrophomina phaseolina
MPH_05611
N
0.000
MYCFIDRAFT_216484
Pseudocercospora fijiensis
MYCFIDRAFT_216484
N
0.000
Mycgr3G100243
Zymoseptoria tritici
Mycgr3G100243
N
0.000
NFIA_086700
Neosartorya fischeri
CADNFIAG00008233
I
0.000
OCS_01600
Ophiocordyceps sinensis
OCS_01600
I
0.000
OIDMADRAFT_152619
Oidiodendron maius
OIDMADRAFT_152619
N
0.000
PAAG_02753
Paracoccidioides sp lutzii
PAAG_02753
N
0.000
PAAG_03678
Paracoccidioides sp lutzii
PAAG_03678
I
0.000
PABG_00737
Paracoccidioides brasiliensis
PABG_00737
I
0.000
PABG_03226
Paracoccidioides brasiliensis
PABG_03226
N
0.000
Pc15g00340
Penicillium chrysogenum
Pc15g00340
N
0.000
PCH_Pc15g00340
Penicillium rubens
PCH_Pc15g00340
N
0.000
PDE_08558
Penicillium oxalicum
PDE_08558
I
0.000
PDIP_10950
Penicillium digitatum
PDIP_10950
N
0.000
PEX1_002010
Penicillium expansum
PEX1_002010
N
0.000
PITC_071780
Penicillium italicum
PITC_071780
N
0.000
PMAA_041870
Talaromyces marneffei
PMAA_041870
I
0.000
PMAA_041870
Penicillium marneffei
PMAA_041870
I
0.000
PMAA_048690
Penicillium marneffei
PMAA_048690
N
0.000
PMAA_048690
Talaromyces marneffei
PMAA_048690
N
0.000
PTRG_11285
Pyrenophora triticirepentis
PTRG_11285
N
0.000
PTT_11312
Pyrenophora teres
PTT_11312
N
0.000
PV05_05867
Exophiala xenobiotica
PV05_05867
N
0.000
PV06_07091
Exophiala oligosperma
PV06_07091
N
0.000
PV08_00631
Exophiala spinifera
PV08_00631
N
0.000
PV09_03082
Verruconis gallopava
PV09_03082
N
0.000
PV11_00424
Exophiala sideris
PV11_00424
N
0.000
PVAR5_2500
Byssochlamys spectabilis
PVAR5_2500
I
0.000
PVAR5_3215
Byssochlamys spectabilis
PVAR5_3215
I
0.000
SEPMUDRAFT_150864
Sphaerulina musiva
SEPMUDRAFT_150864
N
0.000
SETTUDRAFT_172422
Setosphaeria turcica
SETTUDRAFT_172422
N
0.000
SNOG_13663
Stagonospora nodorum
SNOG_13663
N
0.000
SNOG_13663
Phaeosphaeria nodorum
SNOG_13663
N
0.000
SS1G_01353
Sclerotinia sclerotiorum
SS1G_01353
N
0.000
TEQG_05320
Trichophyton equinum
TEQG_05320
I
0.000
TESG_06426
Trichophyton tonsurans
TESG_06426
I
0.000
TRIATDRAFT_34316
Trichoderma atroviride
TRIATDRAFT_34316
I
0.000
TRIVIDRAFT_28488
Trichoderma virens
TRIVIDRAFT_28488
N
0.000
TRV_07383
Trichophyton verrucosum
TRV_07383
I
0.000
TSTA_038740
Talaromyces stipitatus
TSTA_038740
I
0.000
TSTA_076120
Talaromyces stipitatus
TSTA_076120
I
0.000
U727_00433201101
Penicillium solitum
U727_00433201101
N
0.000
UCRNP2_3613
Neofusicoccum parvum
UCRNP2_3613
N
0.000
W97_05295
Coniosporium apollinis
W97_05295
N
0.000
X797_005336
Metarhizium robertsii
X797_005336
N
0.000
Z518_08584
Rhinocladiella mackenziei
Z518_08584
N
0.000
Z519_07868
Cladophialophora bantiana
Z519_07868
N
0.000
Z519_09408
Cladophialophora bantiana
Z519_09408
N
0.000