Gorai.002G064500 (Gossypium raimondii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Gorai.002G064500 T344852_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.956 0.507
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.956 0.507
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.954 0.470
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.954 0.470
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.954 0.470
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.936 0.478
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.894 0.373
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.351
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.886 0.351
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.882 0.388
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.851 0.336
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.851 0.343
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.851 0.343
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.851 0.336
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G064500.1 TCP 35 182
Gorai.002G064500.2 TCP 35 182

Links

Other TCP family TFs
Other Gossypium raimondii TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_07754 Capronia epimyces A1O3_07754 I 0.000
AB07764.1 Alternaria brassicicola AB07764.1 N 0.000
ACLA_050890 Aspergillus clavatus CADACLAG00004878 N 0.000
AFUA_4G11850 Aspergillus fumigatus CADAFUAG00008171 N 0.000
ANIA_05533 Aspergillus nidulans CADANIAG00003549 N 0.000
AUEXF2481DRAFT_152 Aureobasidium subglaciale AUEXF2481DRAFT_152 N 0.000
BAUCODRAFT_118634 Baudoinia compniacensis BAUCODRAFT_118634 I 0.000
Bcin11g04510 Botrytis cinerea Bcin11g04510 N 0.000
BDDG_05568 Blastomyces dermatitidis BDDG_05568 N 0.000
BGHDH14_bgh04332 Blumeria graminis BGHDH14_bgh04332 N 0.000
CADAFLAG00002161 Aspergillus flavus CADAFLAG00002161 N 0.000
CGGC5_7996 Colletotrichum gloeosporioides CGGC5_7996 N 0.000
CIMG_01608 Coccidioides immitis CIMG_01608 N 0.000
Cob_05618 Colletotrichum orbiculare Cob_05618 N 0.000
COCC4DRAFT_160626 Bipolaris maydis COCC4DRAFT_160626 N 0.000
COCCADRAFT_7354 Bipolaris zeicola COCCADRAFT_7354 N 0.000
COCMIDRAFT_6100 Bipolaris oryzae COCMIDRAFT_6100 N 0.000
COCSADRAFT_229975 Bipolaris sorokiniana COCSADRAFT_229975 N 0.000
COCVIDRAFT_27743 Bipolaris victoriae COCVIDRAFT_27743 N 0.000
CPC735_048660 Coccidioides posadasii CPC735_048660 N 0.000
CPUR_07267 Claviceps purpurea CPUR_07267 N 0.000
CSUB01_03005 Colletotrichum sublineola CSUB01_03005 N 0.000
DOTSEDRAFT_68927 Dothistroma septosporum DOTSEDRAFT_68927 N 0.000
DRE_02202 Drechslerella stenobrocha DRE_02202 I 0.000
estExt_fgenesh1_pg.C_chr_10968 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10968 N 0.000
estExt_Genewise1.C_31830 Neurospora discreta estExt_Genewise1.C_31830 N 0.000
EV44_g1635 Erysiphe necator EV44_g1635 N 0.000
e_gw1.00009.84.1 Aspergillus carbonarius e_gw1.00009.84.1 N 0.000
e_gw1.1.1647.1 Nectria haematococca e_gw1.1.1647.1 N 0.000
FFUJ_06813 Fusarium fujikuroi FFUJ_06813 N 0.000
fgenesh1_pg.C_scaffold_1000879 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1000879 N 0.000
fgenesh1_pg.C_scaffold_6000005 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_6000005 N 0.000
GGTG_09987 Gaeumannomyces graminis GGTG_09987 N 0.000
GLRG_10847 Colletotrichum graminicola GLRG_10847 N 0.000
GMDG_00534 Pseudogymnoascus destructans GMDG_00534 N 0.000
GSTUM_00011438001 Tuber melanosporum GSTUM_00011438001 N 0.000
H072_9722 Dactylellina haptotyla H072_9722 N 0.000
H101_00713 Trichophyton interdigitale H101_00713 N 0.000
H102_01651 Trichophyton rubrum H102_01651 N 0.000
H105_01667 Trichophyton soudanense H105_01667 N 0.000
HCBG_03369 Histoplasma capsulatum HCBG_03369 N 0.000
HMPREF1624_02273 Sporothrix schenckii HMPREF1624_02273 N 0.000
LEMA_P055840.1 Leptosphaeria maculans LEMA_P055840.1 N 0.000
M437DRAFT_77772 Aureobasidium melanogenum M437DRAFT_77772 N 0.000
M438DRAFT_349770 Aureobasidium pullulans M438DRAFT_349770 N 0.000
MAJ_08454 Metarhizium majus MAJ_08454 N 0.000
MANI_010211 Metarhizium anisopliae MANI_010211 N 0.000
MBM_05784 Marssonina brunnea MBM_05784 N 0.000
MBR_09134 Metarhizium brunneum MBR_09134 N 0.000
MCYG_06310 Microsporum canis MCYG_06310 N 0.000
MCYG_06310 Arthroderma otae MCYG_06310 N 0.000
MGG_05153 Magnaporthe oryzae MGG_05153 I 0.000
MGG_08753 Magnaporthe oryzae MGG_08753 N 0.000
MGU_09793 Metarhizium guizhouense MGU_09793 N 0.000
MGYG_06755 Microsporum gypseum MGYG_06755 N 0.000
moc3 Schizosaccharomyces pombe SPAC821.07c I 0.000
MYCFIDRAFT_76004 Pseudocercospora fijiensis MYCFIDRAFT_76004 N 0.000
Mycgr3G107324 Zymoseptoria tritici Mycgr3G107324 N 0.000
MYCTH_2299657 Myceliophthora thermophila MYCTH_2299657 N 0.000
NechaG30529 Fusarium solani NechaG30529 N 0.000
NEUTE1DRAFT_78259 Neurospora tetrasperma NEUTE1DRAFT_78259 N 0.000
NFIA_104380 Neosartorya fischeri CADNFIAG00009977 N 0.000
OCS_01600 Ophiocordyceps sinensis OCS_01600 I 0.000
OIDMADRAFT_122144 Oidiodendron maius OIDMADRAFT_122144 N 0.000
PAAG_02753 Paracoccidioides sp lutzii PAAG_02753 N 0.000
PABG_03226 Paracoccidioides brasiliensis PABG_03226 N 0.000
PAS_chr1-4_0290 Komagataella pastoris PAS_chr1-4_0290 N 0.000
Pc22g04960 Penicillium chrysogenum Pc22g04960 N 0.000
PCH_Pc22g04960 Penicillium rubens PCH_Pc22g04960 N 0.000
PDE_08558 Penicillium oxalicum PDE_08558 I 0.000
PDIP_42870 Penicillium digitatum PDIP_42870 N 0.000
PEX1_006710 Penicillium expansum PEX1_006710 N 0.000
PFICI_15376 Pestalotiopsis fici PFICI_15376 N 0.000
PGUG_01274 Candida guilliermondii PGUG_01274 N 0.000
PGUG_01274 Meyerozyma guilliermondii PGUG_01274 N 0.000
PITC_093240 Penicillium italicum PITC_093240 N 0.000
PMAA_041870 Talaromyces marneffei PMAA_041870 I 0.000
PMAA_041870 Penicillium marneffei PMAA_041870 I 0.000
PTRG_00667 Pyrenophora triticirepentis PTRG_00667 N 0.000
PTT_18058 Pyrenophora teres PTT_18058 N 0.000
PV07_03576 Cladophialophora immunda PV07_03576 N 0.000
PV09_02355 Verruconis gallopava PV09_02355 N 0.000
PVAR5_3215 Byssochlamys spectabilis PVAR5_3215 I 0.000
SAPIO_CDS0057 Scedosporium apiospermum SAPIO_CDS0057 N 0.000
SEPMUDRAFT_146288 Sphaerulina musiva SEPMUDRAFT_146288 N 0.000
SETTUDRAFT_165742 Setosphaeria turcica SETTUDRAFT_165742 N 0.000
SMAC_03029 Sordaria macrospora SMAC_03029 N 0.000
SNOG_06887 Stagonospora nodorum SNOG_06887 N 0.000
SNOG_06887 Phaeosphaeria nodorum SNOG_06887 N 0.000
TEQG_07547 Trichophyton equinum TEQG_07547 N 0.000
TESG_07050 Trichophyton tonsurans TESG_07050 N 0.000
THITE_2115656 Thielavia terrestris THITE_2115656 I 0.000
THITE_2116108 Thielavia terrestris THITE_2116108 N 0.000
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I 0.000
TSTA_076120 Talaromyces stipitatus TSTA_076120 I 0.000
U727_00433920131 Penicillium solitum U727_00433920131 N 0.000
UCRNP2_5943 Neofusicoccum parvum UCRNP2_5943 N 0.000
V499_04709 Pseudogymnoascus pannorum V499_04709 N 0.000
VHEMI02684 Torrubiella hemipterigena VHEMI02684 N 0.000
W97_00715 Coniosporium apollinis W97_00715 N 0.000
X797_002926 Metarhizium robertsii X797_002926 N 0.000
X797_004155 Metarhizium robertsii X797_004155 N 0.000
XP_002490409.1 Pichia pastoris XP_002490409.1 N 0.000
Z517_01120 Fonsecaea pedrosoi Z517_01120 N 0.000