MDP0000149841 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000149841 T344914_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.905 0.671
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.903 0.671
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.902 0.633
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.902 0.633
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.902 0.633
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.898 0.544
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.890 0.544
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.890 0.544
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.873 0.620
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.872 0.544
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.828 0.481
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000149841 TCP 30 110

Links

Other TCP family TFs
Other Malus domestica TFs

371 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA037277 Oryza indica BGIOSGA037277 N
BGIOSGA037293 Oryza indica BGIOSGA037293 N
BGIOSGA037294 Oryza indica BGIOSGA037294 N
LPERR12G08400 Leersia perrieri LPERR12G08400 N
OB0134G10010 Oryza brachyantha OB0134G10010 N
OB0325G10010 Oryza brachyantha OB0325G10010 N
OB12G18970 Oryza brachyantha OB12G18970 N
OBART12G09720 Oryza barthii OBART12G09720 N
OBART12G09840 Oryza barthii OBART12G09840 N
OBART12G09870 Oryza barthii OBART12G09870 N
OGLUM12G10910 Oryza glumaepatula OGLUM12G10910 N
OGLUM12G11050 Oryza glumaepatula OGLUM12G11050 N
OGLUM12G11100 Oryza glumaepatula OGLUM12G11100 N
OLONG_012845 Oryza longistaminata OLONG_012845 N
OLONG_017316 Oryza longistaminata OLONG_017316 N
OMERI12G11070 Oryza meridionalis OMERI12G11070 N
ONIVA01G27180 Oryza nivara ONIVA01G27180 N
ONIVA08G15060 Oryza nivara ONIVA08G15060 N
ONIVA12G09980 Oryza nivara ONIVA12G09980 N
OPUNC01G25690 Oryza punctata OPUNC01G25690 N
OPUNC12G08740 Oryza punctata OPUNC12G08740 N
OPUNC12G08870 Oryza punctata OPUNC12G08870 N
ORGLA12G0092600 Oryza glaberrima ORGLA12G0092600 N
ORGLA12G0092700 Oryza glaberrima ORGLA12G0092700 N
ORUFI12G10910 Oryza rufipogon ORUFI12G10910 N
ORUFI12G10940 Oryza rufipogon ORUFI12G10940 N