MDP0000320363 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000320363 T344942_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.949 0.429
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.928 0.409
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.928 0.409
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.926 0.390
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.923 0.390
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.915 0.357
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.915 0.357
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.880 0.312
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.865 0.318
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.847 0.305
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.847 0.305
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.845 0.305
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.845 0.305
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.845 0.305
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.843 0.292
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.843 0.292
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000320363 TCP 56 376

Links

Other TCP family TFs
Other Malus domestica TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_04095 Capronia coronata A1O1_04095 N 0.000
A1O3_01321 Capronia epimyces A1O3_01321 N 0.000
A1O5_10088 Cladophialophora psammophila A1O5_10088 N 0.000
A1O7_05748 Cladophialophora yegresii A1O7_05748 N 0.000
A1O9_04250 Exophiala aquamarina A1O9_04250 N 0.000
AB06078.1 Alternaria brassicicola AB06078.1 N 0.000
AFUA_1G03210 Aspergillus fumigatus CADAFUAG00009239 N 0.000
ARB_04542 Arthroderma benhamiae ARB_04542 N 0.000
ATEG_02532 Aspergillus terreus CADATEAG00003645 N 0.000
BBA_07259 Beauveria bassiana BBA_07259 N 0.000
Bcin10g04400 Botrytis cinerea Bcin10g04400 N 0.000
BDDG_07653 Blastomyces dermatitidis BDDG_07653 N 0.000
CADAFLAG00000799 Aspergillus flavus CADAFLAG00000799 N 0.000
CADANGAG00000476 Aspergillus niger CADANGAG00000476 N 0.000
CADAORAG00002728 Aspergillus oryzae CADAORAG00002728 N 0.000
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N 0.000
CIMG_04804 Coccidioides immitis CIMG_04804 N 0.000
COCC4DRAFT_54097 Bipolaris maydis COCC4DRAFT_54097 N 0.000
COCCADRAFT_88089 Bipolaris zeicola COCCADRAFT_88089 N 0.000
COCMIDRAFT_25841 Bipolaris oryzae COCMIDRAFT_25841 N 0.000
COCSADRAFT_221816 Bipolaris sorokiniana COCSADRAFT_221816 N 0.000
COCVIDRAFT_99762 Bipolaris victoriae COCVIDRAFT_99762 N 0.000
CPC735_070400 Coccidioides posadasii CPC735_070400 N 0.000
EPUS_03928 Endocarpon pusillum EPUS_03928 N 0.000
estExt_fgenesh1_pg.C_chr_4.10127 Pichia stipitis estExt_fgenesh1_pg.C_chr_4.10127 N 0.000
estExt_fgenesh1_pm.C_250032 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_250032 N 0.000
estExt_Genewise1.C_chr_100086 Mycosphaerella graminicola estExt_Genewise1.C_chr_100086 N 0.000
EURHEDRAFT_404004 Aspergillus ruber EURHEDRAFT_404004 N 0.000
e_gw1.14.618.1 Nectria haematococca e_gw1.14.618.1 N 0.000
FFUJ_12231 Fusarium fujikuroi FFUJ_12231 N 0.000
fgenesh1_pm.00129_#_356 Aspergillus carbonarius fgenesh1_pm.00129_#_356 N 0.000
FGRRES_01915 Fusarium graminearum FGRRES_01915 N 0.000
flbD Aspergillus nidulans CADANIAG00002443 N 0.000
FOXG_04220 Fusarium oxysporum FOXG_04220 N 0.000
FOXG_14431 Fusarium oxysporum FOXG_14431 N 0.000
FOXG_15050 Fusarium oxysporum FOXG_15050 N 0.000
FPSE_09133 Fusarium pseudograminearum FPSE_09133 N 0.000
FVEG_07339 Fusarium verticillioides FVEG_07339 N 0.000
G647_06777 Cladophialophora carrionii G647_06777 N 0.000
GMDG_02112 Pseudogymnoascus destructans GMDG_02112 N 0.000
GMDG_03182 Pseudogymnoascus destructans GMDG_03182 N 0.000
GSTUM_00009849001 Tuber melanosporum GSTUM_00009849001 N 0.000
H101_07912 Trichophyton interdigitale H101_07912 N 0.000
H102_02396 Trichophyton rubrum H102_02396 N 0.000
H105_02417 Trichophyton soudanense H105_02417 N 0.000
HCBG_00682 Histoplasma capsulatum HCBG_00682 N 0.000
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N 0.000
HMPREF1541_08408 Cyphellophora europaea HMPREF1541_08408 N 0.000
LELG_00993 Lodderomyces elongisporus LELG_00993 N 0.000
MCYG_05945 Microsporum canis MCYG_05945 N 0.000
MCYG_05945 Arthroderma otae MCYG_05945 N 0.000
MGYG_06020 Microsporum gypseum MGYG_06020 N 0.000
Mycgr3G62856 Zymoseptoria tritici Mycgr3G62856 N 0.000
NechaG50578 Fusarium solani NechaG50578 N 0.000
NFIA_021310 Neosartorya fischeri CADNFIAG00000827 N 0.000
OCS_04024 Ophiocordyceps sinensis OCS_04024 N 0.000
OIDMADRAFT_141697 Oidiodendron maius OIDMADRAFT_141697 N 0.000
PAAG_05598 Paracoccidioides sp lutzii PAAG_05598 N 0.000
PABG_06170 Paracoccidioides brasiliensis PABG_06170 N 0.000
Pc13g03170 Penicillium chrysogenum Pc13g03170 N 0.000
PCH_Pc13g03170 Penicillium rubens PCH_Pc13g03170 N 0.000
PDE_03008 Penicillium oxalicum PDE_03008 N 0.000
PDIP_83900 Penicillium digitatum PDIP_83900 N 0.000
PEX1_072030 Penicillium expansum PEX1_072030 N 0.000
PFICI_08362 Pestalotiopsis fici PFICI_08362 N 0.000
PGUG_01009 Candida guilliermondii PGUG_01009 N 0.000
PGUG_01009 Meyerozyma guilliermondii PGUG_01009 N 0.000
PICST_67483 Scheffersomyces stipitis PICST_67483 N 0.000
PITC_046280 Penicillium italicum PITC_046280 N 0.000
PMAA_050990 Talaromyces marneffei PMAA_050990 N 0.000
PMAA_050990 Penicillium marneffei PMAA_050990 N 0.000
PTRG_05162 Pyrenophora triticirepentis PTRG_05162 N 0.000
PTT_11410 Pyrenophora teres PTT_11410 N 0.000
PV04_06122 Capronia semiimmersa PV04_06122 N 0.000
PV05_05003 Exophiala xenobiotica PV05_05003 N 0.000
PV07_03969 Cladophialophora immunda PV07_03969 N 0.000
PV08_04239 Exophiala spinifera PV08_04239 N 0.000
PV09_06457 Verruconis gallopava PV09_06457 N 0.000
PV10_07750 Exophiala mesophila PV10_07750 N 0.000
PV11_01510 Exophiala sideris PV11_01510 N 0.000
PVAR5_1147 Byssochlamys spectabilis PVAR5_1147 N 0.000
SBOR_10075 Sclerotinia borealis SBOR_10075 N 0.000
SETTUDRAFT_150444 Setosphaeria turcica SETTUDRAFT_150444 N 0.000
SNOG_13398 Stagonospora nodorum SNOG_13398 N 0.000
SNOG_13398 Phaeosphaeria nodorum SNOG_13398 N 0.000
SPAPADRAFT_71207 Spathaspora passalidarum SPAPADRAFT_71207 N 0.000
SS1G_12488 Sclerotinia sclerotiorum SS1G_12488 N 0.000
TEQG_04364 Trichophyton equinum TEQG_04364 N 0.000
TESG_07658 Trichophyton tonsurans TESG_07658 N 0.000
TRV_02801 Trichophyton verrucosum TRV_02801 N 0.000
TSTA_021880 Talaromyces stipitatus TSTA_021880 N 0.000
U727_00430300601 Penicillium solitum U727_00430300601 N 0.000
UREG_06714 Uncinocarpus reesii UREG_06714 N 0.000
V499_07080 Pseudogymnoascus pannorum V499_07080 N 0.000
VDAG_04562 Verticillium dahliae VDAG_04562 N 0.000
VDBG_09326 Verticillium albo atrum VDBG_09326 N 0.000
VDBG_09326 Verticillium alfalfae VDBG_09326 N 0.000
VHEMI10091 Torrubiella hemipterigena VHEMI10091 N 0.000
Z517_00692 Fonsecaea pedrosoi Z517_00692 N 0.000
Z518_09578 Rhinocladiella mackenziei Z518_09578 N 0.000
Z519_04250 Cladophialophora bantiana Z519_04250 N 0.000