Pavir.Ea02793 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.Ea02793 T344996_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.950 0.819
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.938 0.792
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.935 0.792
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.926 0.681
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.902 0.625
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.902 0.625
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.892 0.722
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.892 0.722
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.884 0.681
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.884 0.681
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.875 0.611
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.875 0.611
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.875 0.611
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.868 0.583
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.864 0.583
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.845 0.583
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea02793.1.p TCP 46 135
Pavir.Ea02793.2.p TCP 46 135

Links

Other TCP family TFs
Other Panicum virgatum TFs

426 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03703 Capronia coronata A1O1_03703 N 0.000
A1O3_07754 Capronia epimyces A1O3_07754 I 0.000
A1O7_01132 Cladophialophora yegresii A1O7_01132 I 0.000
A1O9_01837 Exophiala aquamarina A1O9_01837 I 0.000
ACLA_070410 Aspergillus clavatus CADACLAG00006808 N 0.000
ACRE_013750 Acremonium chrysogenum ACRE_013750 I 0.000
AFUA_2G11460 Aspergillus fumigatus CADAFUAG00004521 I 0.000
AFUA_5G01460 Aspergillus fumigatus CADAFUAG00002865 N 0.000
AGABI2DRAFT_117758 Agaricus bisporus AGABI2DRAFT_117758 N 0.000
ARB_01321 Arthroderma benhamiae ARB_01321 I 0.000
AUEXF2481DRAFT_24415 Aureobasidium subglaciale AUEXF2481DRAFT_24415 I 0.000
BBA_01514 Beauveria bassiana BBA_01514 I 0.000
BBA_07071 Beauveria bassiana BBA_07071 I 0.000
BDDG_02031 Blastomyces dermatitidis BDDG_02031 I 0.000
BN946_scf184775.g19 Trametes cinnabarina BN946_scf184775.g19 N 0.000
BOTBODRAFT_202080 Botryobasidium botryosum BOTBODRAFT_202080 N 0.000
CADAORAG00008529 Aspergillus oryzae CADAORAG00008529 N 0.000
CCM_04341 Cordyceps militaris CCM_04341 I 0.000
CERSUDRAFT_114532 Ceriporiopsis subvermispora CERSUDRAFT_114532 I 0.000
CFIO01_12268 Colletotrichum fioriniae CFIO01_12268 I 0.000
CGGC5_2102 Colletotrichum gloeosporioides CGGC5_2102 I 0.000
CH063_01368 Colletotrichum higginsianum CH063_01368 N 0.000
CIMG_04661 Coccidioides immitis CIMG_04661 I 0.000
CIMG_08192 Coccidioides immitis CIMG_08192 I 0.000
COCC4DRAFT_19355 Bipolaris maydis COCC4DRAFT_19355 I 0.000
COCCADRAFT_32122 Bipolaris zeicola COCCADRAFT_32122 I 0.000
COCMIDRAFT_24418 Bipolaris oryzae COCMIDRAFT_24418 I 0.000
COCSADRAFT_306311 Bipolaris sorokiniana COCSADRAFT_306311 I 0.000
COCVIDRAFT_12188 Bipolaris victoriae COCVIDRAFT_12188 I 0.000
CPC735_022090 Coccidioides posadasii CPC735_022090 I 0.000
CSUB01_08743 Colletotrichum sublineola CSUB01_08743 I 0.000
estExt_fgenesh1_pg.C_40169 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40169 I 0.000
estExt_fgenesh1_pm.C_chr_50216 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_50216 N 0.000
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 Nectria haematococca estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 I 0.000
estExt_fgenesh2_pm.C_30405 Heterobasidion annosum estExt_fgenesh2_pm.C_30405 N 0.000
EURHEDRAFT_513477 Aspergillus ruber EURHEDRAFT_513477 N 0.000
EURHEDRAFT_528519 Aspergillus ruber EURHEDRAFT_528519 I 0.000
e_gw1.3.1267.1 Cryphonectria parasitica e_gw1.3.1267.1 I 0.000
F503_05786 Ophiostoma piceae uamh F503_05786 I 0.000
FFUJ_04988 Fusarium fujikuroi FFUJ_04988 I 0.000
FGRRES_06160 Fusarium graminearum FGRRES_06160 I 0.000
FIBRA_03539 Fibroporia radiculosa FIBRA_03539 I 0.000
FOMPIDRAFT_1024907 Fomitopsis pinicola FOMPIDRAFT_1024907 I 0.000
FOXG_08550 Fusarium oxysporum FOXG_08550 I 0.000
FPSE_02512 Fusarium pseudograminearum FPSE_02512 I 0.000
G647_01190 Cladophialophora carrionii G647_01190 I 0.000
GALMADRAFT_249209 Galerina marginata GALMADRAFT_249209 I 0.000
GGTG_05803 Gaeumannomyces graminis GGTG_05803 I 0.000
GLOTRDRAFT_115334 Gloeophyllum trabeum GLOTRDRAFT_115334 N 0.000
GLRG_02776 Colletotrichum graminicola GLRG_02776 I 0.000
H101_03862 Trichophyton interdigitale H101_03862 I 0.000
H101_07358 Trichophyton interdigitale H101_07358 I 0.000
H102_03415 Trichophyton rubrum H102_03415 I 0.000
H105_03436 Trichophyton soudanense H105_03436 I 0.000
HETIRDRAFT_410078 Heterobasidion irregulare HETIRDRAFT_410078 N 0.000
HMPREF1541_00116 Cyphellophora europaea HMPREF1541_00116 I 0.000
JAAARDRAFT_136956 Jaapia argillacea JAAARDRAFT_136956 I 0.000
LEMA_P120870.1 Leptosphaeria maculans LEMA_P120870.1 I 0.000
M378DRAFT_197822 Amanita muscaria M378DRAFT_197822 I 0.000
M404DRAFT_130508 Pisolithus tinctorius M404DRAFT_130508 I 0.000
M413DRAFT_441943 Hebeloma cylindrosporum M413DRAFT_441943 I 0.000
M437DRAFT_14692 Aureobasidium melanogenum M437DRAFT_14692 I 0.000
M438DRAFT_323991 Aureobasidium pullulans M438DRAFT_323991 I 0.000
MAC_00726 Metarhizium acridum MAC_00726 N 0.000
MAJ_01716 Metarhizium majus MAJ_01716 N 0.000
MAM_03911 Metarhizium album MAM_03911 N 0.000
MANI_020691 Metarhizium anisopliae MANI_020691 N 0.000
MAPG_04101 Magnaporthe poae MAPG_04101 I 0.000
MBM_00253 Marssonina brunnea MBM_00253 I 0.000
MBR_00349 Metarhizium brunneum MBR_00349 N 0.000
MCYG_02230 Microsporum canis MCYG_02230 I 0.000
MCYG_02230 Arthroderma otae MCYG_02230 I 0.000
MCYG_05833 Microsporum canis MCYG_05833 I 0.000
MCYG_05833 Arthroderma otae MCYG_05833 I 0.000
MGG_05153 Magnaporthe oryzae MGG_05153 I 0.000
MGG_07131 Magnaporthe oryzae MGG_07131 I 0.000
MGU_01192 Metarhizium guizhouense MGU_01192 N 0.000
MGYG_02927 Microsporum gypseum MGYG_02927 I 0.000
MGYG_06143 Microsporum gypseum MGYG_06143 I 0.000
Moror_6819 Moniliophthora roreri Moror_6819 I 0.000
Mycgr3G100243 Zymoseptoria tritici Mycgr3G100243 N 0.000
NechaG103398 Fusarium solani NechaG103398 I 0.000
NFIA_040650 Neosartorya fischeri CADNFIAG00003354 I 0.000
NFIA_086700 Neosartorya fischeri CADNFIAG00008233 I 0.000
OCS_01600 Ophiocordyceps sinensis OCS_01600 I 0.000
PAAG_03678 Paracoccidioides sp lutzii PAAG_03678 I 0.000
PABG_00737 Paracoccidioides brasiliensis PABG_00737 I 0.000
PAXRUDRAFT_132889 Paxillus rubicundulus PAXRUDRAFT_132889 I 0.000
Pc15g00340 Penicillium chrysogenum Pc15g00340 N 0.000
PCH_Pc15g00340 Penicillium rubens PCH_Pc15g00340 N 0.000
PDE_08558 Penicillium oxalicum PDE_08558 I 0.000
PDE_09179 Penicillium oxalicum PDE_09179 I 0.000
PDIP_10950 Penicillium digitatum PDIP_10950 N 0.000
PEX1_002010 Penicillium expansum PEX1_002010 N 0.000
PEX1_066340 Penicillium expansum PEX1_066340 I 0.000
PFICI_05184 Pestalotiopsis fici PFICI_05184 I 0.000
PIIN_01818 Piriformospora indica PIIN_01818 N 0.000
PIIN_04332 Piriformospora indica PIIN_04332 N 0.000
PILCRDRAFT_51 Piloderma croceum PILCRDRAFT_51 I 0.000
PISMIDRAFT_675317 Pisolithus microcarpus PISMIDRAFT_675317 I 0.000
PITC_033600 Penicillium italicum PITC_033600 I 0.000
PITC_071780 Penicillium italicum PITC_071780 N 0.000
PLEOSDRAFT_158391 Pleurotus ostreatus PLEOSDRAFT_158391 I 0.000
PMAA_014320 Talaromyces marneffei PMAA_014320 N 0.000
PMAA_014320 Penicillium marneffei PMAA_014320 N 0.000
PMAA_041870 Talaromyces marneffei PMAA_041870 I 0.000
PMAA_041870 Penicillium marneffei PMAA_041870 I 0.000
PTRG_07169 Pyrenophora triticirepentis PTRG_07169 I 0.000
PTT_16310 Pyrenophora teres PTT_16310 I 0.000
PV04_00855 Capronia semiimmersa PV04_00855 I 0.000
PV06_07392 Exophiala oligosperma PV06_07392 I 0.000
PV10_06359 Exophiala mesophila PV10_06359 I 0.000
PVAR5_2500 Byssochlamys spectabilis PVAR5_2500 I 0.000
PVAR5_3215 Byssochlamys spectabilis PVAR5_3215 I 0.000
PVAR5_5942 Byssochlamys spectabilis PVAR5_5942 I 0.000
S40285_00977 Stachybotrys chlorohalonata S40285_00977 I 0.000
S40288_06232 Stachybotrys chartarum S40288_06232 I 0.000
SAPIO_CDS8046 Scedosporium apiospermum SAPIO_CDS8046 I 0.000
SCHCODRAFT_110416 Schizophyllum commune SCHCODRAFT_110416 N 0.000
SERLA73DRAFT_159962 Serpula lacrymans SERLA73DRAFT_159962 I 0.000
SNOG_00909 Stagonospora nodorum SNOG_00909 I 0.000
SNOG_09854 Stagonospora nodorum SNOG_09854 I 0.000
SNOG_09854 Phaeosphaeria nodorum SNOG_09854 I 0.000
SPAPADRAFT_61489 Spathaspora passalidarum SPAPADRAFT_61489 I 0.000
TEQG_05320 Trichophyton equinum TEQG_05320 I 0.000
TEQG_06790 Trichophyton equinum TEQG_06790 I 0.000
TESG_06426 Trichophyton tonsurans TESG_06426 I 0.000
TESG_06981 Trichophyton tonsurans TESG_06981 I 0.000
TRIATDRAFT_34316 Trichoderma atroviride TRIATDRAFT_34316 I 0.000
TRIREDRAFT_106244 Trichoderma reesei TRIREDRAFT_106244 I 0.000
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I 0.000
TRIVIDRAFT_28488 Trichoderma virens TRIVIDRAFT_28488 N 0.000
TRV_07383 Trichophyton verrucosum TRV_07383 I 0.000
TSTA_020390 Talaromyces stipitatus TSTA_020390 I 0.000
TSTA_038740 Talaromyces stipitatus TSTA_038740 I 0.000
TSTA_076120 Talaromyces stipitatus TSTA_076120 I 0.000
U727_00433201101 Penicillium solitum U727_00433201101 N 0.000
U727_00434270371 Penicillium solitum U727_00434270371 I 0.000
VDAG_08992 Verticillium dahliae VDAG_08992 I 0.000
W97_02535 Coniosporium apollinis W97_02535 I 0.000
X797_005336 Metarhizium robertsii X797_005336 N 0.000
Z517_04525 Fonsecaea pedrosoi Z517_04525 I 0.000
Z519_04194 Cladophialophora bantiana Z519_04194 I 0.000