Pavir.J02457 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.J02457 T345010_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02457.1.p TCP 70 106

Links

Other TCP family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC213524.3_FG003 Zea mays AC213524.3_FG003 I 0.896
BGIOSGA037077 Oryza indica BGIOSGA037077 N 0.905
BRADI3G60350 Brachypodium distachyon BRADI3G60350 I 0.910
BRADI4G35520 Brachypodium distachyon BRADI4G35520 I 0.846
LjSGA_036609.1 Lotus japonicus LjSGA_036609.1 N 0.855
LPERR02G20610 Leersia perrieri LPERR02G20610 N 0.876
MDP0000617459 Malus domestica MDP0000617459 I 0.826
MLOC_35578 Hordeum vulgare MLOC_35578 I 0.903
OB01G51240 Oryza brachyantha OB01G51240 I 0.903
OBART02G32430 Oryza barthii OBART02G32430 N 0.899
OBART03G06780 Oryza barthii OBART03G06780 N 0.868
OGLUM02G26080 Oryza glumaepatula OGLUM02G26080 I 0.908
OGLUM03G06890 Oryza glumaepatula OGLUM03G06890 N 0.864
OPUNC03G20560 Oryza punctata OPUNC03G20560 I 0.873
ORUFI03G06720 Oryza rufipogon ORUFI03G06720 N 0.885
OS02G0641100 Oryza sativa OS02G0641100 I 0.883
Pavir.J36496 Panicum virgatum Pavir.J36496 I 0.938
PK09668.1 Cannabis sativa PK09668.1 I 0.921
Sb03g019510 Sorghum bicolor Sb03g019510 N 0.877
Si030591m.g Setaria italica Si030591m.g I 0.845
Solyc02g094290.1 Solanum lycopersicum Solyc02g094290.1 I 0.824
TCM_022798 Theobroma cacao TCM_022798 I 0.834